Hello, I ran 3d-dna and loaded the results into JuiceBox ( ).
The screenshot ( https://imgur.com/a/izTbb54 ) shows the loaded results. Scaffolds and their names are in green boxes within the chromosomes bins (blue boxes). I am interested to extract the scaffold names for each chromosome.
Is there a way to extract scaffold names (green box ) inside each blue box as shown with any tool ?
Thank you in advance,