gatingML examples needed
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Andrew Box ▴ 10
@andrew-box-13730
Last seen 2.6 years ago
Kansas City, MO - Stowers Institute for…

I'm struggling to work with some published example data that has a companion gatingML file. I want to begin by viewing and plotting all the gates in the analysis schema, ideally with some illustration of the hierarchies.

It's the Nilsson_rare dataset from this flowrepository?

Suggestions for a good reference or example?

flowCore flowUtils gatingML • 396 views
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Jiang, Mike ★ 1.3k
@jiang-mike-4886
Last seen 16 days ago
(Private Address)

Use CytoML to Import gatingML generated from Cytobank. See https://github.com/RGLab/CytoML Then visualize the gates by ggcyto

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Thanks Mike! I'll try it.

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