Question: DESeq2 excess of positive signals
0
gravatar for mesaez
7 weeks ago by
mesaez0
mesaez0 wrote:

Hi all I'm working with DEseq2 on RNAseq data and I observe an excess of positive signals (see attached MA plot). Any idea about how to reduce the noise? Many thanks in advance Maria

MA plot

deseq2 • 53 views
ADD COMMENTlink modified 7 weeks ago by Michael Love23k • written 7 weeks ago by mesaez0
Answer: DESeq2 excess of positive signals
0
gravatar for Michael Love
7 weeks ago by
Michael Love23k
United States
Michael Love23k wrote:

Use an lfcThreshold to define biological significance, for motivation read the DESeq2 paper or vignette on threshold testing.

ADD COMMENTlink written 7 weeks ago by Michael Love23k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 119 users visited in the last hour