Question: ChAMP pipeline error (champ.import)
gravatar for mhebba
10 days ago by
mhebba0 wrote:

I am trying to work on ChAMP. It worked great with simulated data. I am trying it on my results now. I merged two .csv files (controls and samples). I got rid of the Sentrix ID format issue and error about 'incomplete last line'. I still get this error. My arraytype is EPIC. The Sentrix IDs and idat files match but this error persists. I don't know what to do next.

Find CSV Success Reading CSV File Replace SentrixPosition into Array Replace SentrixID into Slide Error in champ.import(directory, arraytype = arraytype) : Error Match between pd file and Green Channel IDAT file.

software error • 49 views
ADD COMMENTlink written 10 days ago by mhebba0
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 270 users visited in the last hour