Question: ChAMP pipeline error (champ.import)
gravatar for mhebba
9 weeks ago by
mhebba0 wrote:

I am trying to work on ChAMP. It worked great with simulated data. I am trying it on my results now. I merged two .csv files (controls and samples). I got rid of the Sentrix ID format issue and error about 'incomplete last line'. I still get this error. My arraytype is EPIC. The Sentrix IDs and idat files match but this error persists. I don't know what to do next.

Find CSV Success Reading CSV File Replace SentrixPosition into Array Replace SentrixID into Slide Error in champ.import(directory, arraytype = arraytype) : Error Match between pd file and Green Channel IDAT file.

software error • 89 views
ADD COMMENTlink written 9 weeks ago by mhebba0
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 207 users visited in the last hour