Question: ComplexHeatmap package will not display heatmaps
0
5 months ago by
jmKeith0
jmKeith0 wrote:

Hi, I'm having an issue with the ComplexHeatmap package. Specifically, when I try to create the heatmap image, R returns the parameters of the map but not the actual image. No errors are reported however. When I use the regular base "heatmap" function, I get an image just fine.

This is what is displayed in my console when I try to use ComplexHeatmap :

> Heatmap(myMatrix)
coords: 0 11
nseq: 15
obs: 165
scale: 0 1273690
label:


Does anyone have any suggestions as to what may be the problem?

written 5 months ago by jmKeith0

Can you make sure to not accidentally call another function in your global namespace by calling the Heatmap function explicitly via ComplexHeatmap::Heatmap(myMatrix)?