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Question: memory limit
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gravatar for Lang Chen
14.6 years ago by
Lang Chen100
Lang Chen100 wrote:
Hi, when I read the cel files bioconductor gives me warning "Error: cannot allocate vector of size 86400 Kb". How can I fix the problem? Your help is greatly appreciated. Lang Chen
ADD COMMENTlink modified 14.6 years ago by Philippe Hupé10 • written 14.6 years ago by Lang Chen100
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gravatar for A.J. Rossini
14.6 years ago by
A.J. Rossini810
A.J. Rossini810 wrote:
Lang Chen <lchen@ms.soph.uab.edu> writes: > when I read the cel files bioconductor gives me warning "Error: cannot > allocate vector of size 86400 Kb". How can I fix the problem? Buy more memory? We'll need a few more details to be more useful than that. best, -tony -- A.J. Rossini rossini@u.washington.edu http://software.biostat.washington.edu/ Biostatistics, U Washington and Fred Hutchinson Cancer Research Center FHCRC:Tu: 206-667-7025 (fax=4812)|Voicemail is pretty sketchy/use Email UW : Th: 206-543-1044 (fax=3286)|Change last 4 digits of phone to FAX CONFIDENTIALITY NOTICE: This e-mail message and any attachments ... {{dropped}}
ADD COMMENTlink written 14.6 years ago by A.J. Rossini810
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gravatar for alessandro.semeria@cramont.it
14.6 years ago by
Look at "Memory" and "memory.limit" on the help of R. A.S. ---------------------------- Alessandro Semeria Models and Simulations Laboratory The Environment Research Center - Montecatini (Edison Group), Via Ciro Menotti 48, 48023 Marina di Ravenna (RA), Italy Tel. +39 544 536811 Fax. +39 544 538663 E-mail: asemeria@cramont.it
ADD COMMENTlink written 14.6 years ago by alessandro.semeria@cramont.it80
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gravatar for Philippe Hupé
14.6 years ago by
Philippe Hupé10 wrote:
Lang Chen wrote: >Hi, > >when I read the cel files bioconductor gives me warning "Error: cannot >allocate vector of size 86400 Kb". How can I fix the problem? > >Your help is greatly appreciated. > >Lang Chen > >_______________________________________________ >Bioconductor mailing list >Bioconductor@stat.math.ethz.ch >https://www.stat.math.ethz.ch/mailman/listinfo/bioconductor > >. > > > Try to launch R withe the command-line flag |--max-mem-size|
ADD COMMENTlink written 14.6 years ago by Philippe Hupé10
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