Question: Print Differentially Expressed Exons From Dexseq Results
3 months ago by
justinkablan225 • 0
justinkablan225 • 0 wrote:
Hello, I'm trying to do some differential expressed exons analysis with DEXSeq package. I got DEXSeq results by : > dxr1 = DEXSeqResults( dxdEFC, padj=0.1 ) Then, I'm looking for print only Up-regulate or Down-regulate exons significantly expressed. Therefore, I done : > write.table(dxr1, "DEXSeq_results" , sep="\t", col.names=T, row.names = T) This script gave me all genes and exons in a single file within more than 60.000 rows what is very difficult to open and then difficult to sort by padj or FDR. I think that someone can help me here to resolve that, I will be very grateful. Best regards.
ADD COMMENT • link •