Question: Cannot down load the "org.Hs.eg.db" completely
0
gravatar for 1650706262
12 days ago by
16507062620
16507062620 wrote:

I copied the Installation package to R (version "3.6") from the "Bioconductor" webside. However the R came up with warnings:

Warning messages:
1: In download.file(url, destfile, method, mode = "wb", ...) :
  downloaded length 331776 != reported length 2030028
2: In unzip(zipname, exdir = dest) 
3: In read.dcf(file.path(pkgname, "DESCRIPTION"), c("Package", "Type")) :
  无法打开压缩文件'S4Vectors/DESCRIPTION'
> library("org.Hs.eg.db")
Error in library("org.Hs.eg.db")
probe software error • 66 views
ADD COMMENTlink modified 12 days ago by Martin Morgan ♦♦ 23k • written 12 days ago by 16507062620
package ‘IRanges’ successfully unpacked and MD5 sums checked
Error in read.dcf(file.path(pkgname, "DESCRIPTION"), c("Package", "Type"))
ADD REPLYlink written 12 days ago by 16507062620
Answer: Cannot down load the "org.Hs.eg.db" completely
0
gravatar for Martin Morgan
12 days ago by
Martin Morgan ♦♦ 23k
United States
Martin Morgan ♦♦ 23k wrote:
Warning messages:
1: In download.file(url, destfile, method, mode = "wb", ...) :
  downloaded length 331776 != reported length 2030028

indicates that the download failed. Likely causes are an unreliable internet connection, disk full, or bad repository (hint for latter: don't set the option BioC_mirror).

ADD COMMENTlink written 12 days ago by Martin Morgan ♦♦ 23k

thangks a lot. well, i tried to download the "org.Hs.eg.db" derectly from the website to intalled it, but there still has some problems:

> install.packages("C:/Users/李文轩/AppData/Local/Temp/RtmpqGa8bx/downloaded_packages/org.Hs.eg.db_3.8.2.tar.gz",repos=NULL, type="source")
Warning message:
In install.packages("C:/Users/李文轩/AppData/Local/Temp/RtmpqGa8bx/downloaded_packages/org.Hs.eg.db_3.8.2.tar.gz",  :
  安装程序包‘C:/Users/李文轩/AppData/Local/Temp/RtmpqGa8bx/downloaded_packages/org.Hs.eg.db_3.8.2.tar.gz’时退出狀態的值不是0
ADD REPLYlink written 12 days ago by 16507062620

Please check disk space, both on the disk that the download file is located, and in the install location(s) indicated by .libPaths(). Is the library location (from .libPaths()) on a network share different from the temporary directory?

ADD REPLYlink modified 12 days ago • written 12 days ago by Martin Morgan ♦♦ 23k
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