Question: (Closed) tokay1, C++14 compiler
0
4 months ago by
snaketron0 wrote:

Hello Bioconductor community,

I maintain the Bioconductor package genphen which depends on rstan for MCMC sampling. To build the package one needs a C++14 compiler.

I have no problem building the package on malbec1 and merida1, but not on tokay1. Any idea of what might have gone wrong on this server and how to use C++14? I have submitted a new package (IgGeneUsage) which also uses rstan and have the same problem (see build report below).

BTW: why do we see this under the C++14 compiler box for tokay1:

Compiler version (' --version' output):
'--version' is not recognized as an internal or external command,
operable program or batch file.


Best

===============================

R CMD BUILD

===============================
* checking for file 'IgGeneUsage/DESCRIPTION' ... OK
* preparing 'IgGeneUsage':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
-----------------------------------
* installing *source* package 'IgGeneUsage' ...
** using staged installation
** libs
Error in .shlib_internal(args) :
C++14 standard requested but CXX14 is not defined
* removing 'C:/Users/pkgbuild/AppData/Local/Temp/RtmpUDyHnY/Rinst315c22dc5ac/IgGeneUsage'
-----------------------------------
ERROR: package installation failed

software error • 127 views
written 4 months ago by snaketron0

Hello snaketron!

We believe that this post does not fit the main topic of this site.

Question appropriate for and asked on bioc-devel mailing list.

For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with.

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