Question: (Closed) tokay1, C++14 compiler
0
gravatar for snaketron
12 weeks ago by
snaketron0
snaketron0 wrote:

Hello Bioconductor community,

I maintain the Bioconductor package genphen which depends on rstan for MCMC sampling. To build the package one needs a C++14 compiler.

I have no problem building the package on malbec1 and merida1, but not on tokay1. Any idea of what might have gone wrong on this server and how to use C++14? I have submitted a new package (IgGeneUsage) which also uses rstan and have the same problem (see build report below).

BTW: why do we see this under the C++14 compiler box for tokay1:

Compiler version (' --version' output):
'--version' is not recognized as an internal or external command,
operable program or batch file.

Best

===============================

 R CMD BUILD

===============================
* checking for file 'IgGeneUsage/DESCRIPTION' ... OK
* preparing 'IgGeneUsage':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package 'IgGeneUsage' ...
** using staged installation
** libs
Error in .shlib_internal(args) : 
  C++14 standard requested but CXX14 is not defined
* removing 'C:/Users/pkgbuild/AppData/Local/Temp/RtmpUDyHnY/Rinst315c22dc5ac/IgGeneUsage'
      -----------------------------------
ERROR: package installation failed
software error • 85 views
ADD COMMENTlink written 12 weeks ago by snaketron0

Hello snaketron!

We believe that this post does not fit the main topic of this site.

Question appropriate for and asked on bioc-devel mailing list.

For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with.

If you disagree please tell us why in a reply below, we'll be happy to talk about it.

Cheers!

ADD REPLYlink written 12 weeks ago by Martin Morgan ♦♦ 23k
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