Question: Choosing Gene ontology package
0
gravatar for na396
3 months ago by
na3960
na3960 wrote:

Hello I have a coexpression network, and I have found the clusters of the gene of it using two different methods. Now I want to compare these two methods with each other with respect to the gene ontology enrichment. Which package or application will you recommend me to use? Thank you

annotation go goenrichment • 125 views
ADD COMMENTlink modified 3 months ago by Lluís Revilla Sancho510 • written 3 months ago by na3960
Answer: Choosing Gene ontology package
0
gravatar for Lluís Revilla Sancho
3 months ago by
European Union
Lluís Revilla Sancho510 wrote:

You can use topGO package to compare the enrichment of these methods, or compare the similarity of the clusters using GOSemSim

ADD COMMENTlink written 3 months ago by Lluís Revilla Sancho510
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