conda install of diffHic
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smithgr • 0
@smithgr-21664
Last seen 2.1 years ago

I'm trying to install diffHic in my conda env.

OS centos 6.10 conda v4.7.11 r 3.6.0

I've run: conda create -y -n R-3.6.0 -c conda-forge r-base=3.6.0 conda activate R-3.6.0 conda install -c r r-devtools  conda install -c bioconda bioconductor-diffhic

library(diffHic) returns:

Error: package or namespace load failed for ‘diffHic’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]): namespace ‘blob’ 1.1.1 is being loaded, but >= 1.2.0 is required

I don't see a linux version of blob > 1.1.1

Any help would be greatly appreciated.

diffHic conda • 245 views
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Entering edit mode
Aaron Lun ★ 27k
@alun
Last seen 54 minutes ago
The city by the bay

Seems like a conda problem to me. CRAN indicates that blob 1.2.0 is available:

https://cran.r-project.org/web/packages/blob/index.html

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