gene Isoforms quantification using RNA-seq data
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@angelcampos-9083
Last seen 2.2 years ago

Which are the available packages in Bioconductor to quantify gene isoforms?

TIA

gene isoform quantification rna-seq • 558 views
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RSEM is best option you can go for

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Salmon is very good, rsem is also good but very slow. The above comment could be misleading.

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swbarnes2 ★ 1.2k
@swbarnes2-14086
Last seen 1 hour ago
San Diego

I think Salmon and Kallisto will quantify isoforms as well, but I don't think any of those are available through bioconductor

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@chudarchudar-9587
Last seen 3.3 years ago

RSEM

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