How to identify all SRPs with GTEx bigwig files?
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hyp15 • 0
@hyp15-21655
Last seen 19 months ago

In my previous conversation (https://support.bioconductor.org/p/123799/), I got helped a lot as to how to retrieve all bigwig files in an SRP. I just learned that GTEx bigwig files are distributed through multiple SRPs. Is there any way to locate all the SRPs that have GTEx bigwig files?

Thank you very much in advance! Recount is a great tool; It helps researchers save a lot of time!

Best, HJ

recount • 141 views
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Hi,

Can you rephrase your question please? I’ didn’t understand what you were asking.

Like, what do you mean by learning that GTEx BigWig files are distributed with multiple SRPs? Is that from recount or some code you ran or from another website/tool? Are you talking about GTEx v6 RNA-seq samples or v8 or both?

Best, Leo

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