Question: goCluster results
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13.6 years ago by
kfbargad@ehu.es270 wrote:
Dear list I am trying to use goCluster package with a list of my d.e genes and I am getting an odd result that is rather different to the one shown in the user manual. I start with a list of d.e genes from limma >selected4GO Expression Set (exprSet) with 733 genes 6 samples phenoData object with 1 variables and 6 cases varLabels sample: arbitrary numbering Configuring goCluster, I type "selected4GO" as the variable name of the dataset, "rownames" as the variable name for the rows of the dataset. I specify "rat230a" as the metadata package, and leave blank the next step of the process, where the linker between genes and annotation is asked for. I attach an image of the output I obtain from >display(selectedExecuted, selection = 2) Is there anything I am missing? Thanks in advance, David
annotation process gocluster • 318 views
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