AnnBuilder package and URLs
1
0
Entering edit mode
Tabare Mourot ▴ 100
@tabare-mourot-1672
Last seen 9.6 years ago
Hi, I am using AnnBuilder package. I don't want to download the base from ncbi each time i make a package. so i have downloaded them and put them on my local disk but now i get an error message when trying to connect to the base : URL /home/tmourot/Work/Scripts/tmp/EG/gene2accession.gz is incorrect or the target site is not responding! Can someone help me please thank you. -- MOUROT Tabar? Stagiaire Master Pro BioInfo Plateforme transcriptome Institut de G?nomique Fonctionnelle 141, rue de la Cardonille 34094 Montpellier Cedex 5 Tel : +33 (0)4 67 14 29 64 E-mail : tabare.mourot at igf.cnrs.fr -- Passerelle antivirus IGF --
AnnBuilder AnnBuilder • 820 views
ADD COMMENT
0
Entering edit mode
@ting-yuan-liu-fhcrc-1221
Last seen 9.6 years ago
Hi Tabare, Did you set the argument "fromWeb=FALSE"? BTW, could you provide (1) the script you used to build annotation packages, and (2) the output of sessionInfo() so that we could have more ideas about what's going on in your process? Thanks, Ting-Yuan ______________________________________ Ting-Yuan Liu Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center Seattle, WA, USA ______________________________________ On Mon, 3 Apr 2006, Tabare Mourot wrote: > Hi, > I am using AnnBuilder package. I don't want to download the base from > ncbi each time i make a package. so i have downloaded them and put them > on my local disk but now i get an error message when trying to connect > to the base : > URL /home/tmourot/Work/Scripts/tmp/EG/gene2accession.gz is incorrect or > the target site is not responding! > > Can someone help me please > thank you. > > -- > MOUROT Tabar? > Stagiaire Master Pro BioInfo > Plateforme transcriptome > Institut de G?nomique Fonctionnelle > 141, rue de la Cardonille > 34094 Montpellier Cedex 5 > > Tel : +33 (0)4 67 14 29 64 > E-mail : tabare.mourot at igf.cnrs.fr > > > -- > Passerelle antivirus IGF > -- > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor >
ADD COMMENT

Login before adding your answer.

Traffic: 803 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6