I have a question. How can one breakdown the output for plotEigengeneNetworks() function? In the tutorial, it shows how one can examine the adjacency of a clinical trait with modules. The map shows pretty clear and informative results.
However, in my case, I have 2 different traits and 269 modules in which it produces a big heatmap. Is it possible to extract the dataframe containing only the adjacency score then based on that I can make a heatmap only containing my clinical trait as y-axis and the modules on the other axis so that the heatmap will be more understandable?? Thanks.