Question: CRISPRseek - adding CRISPRscan score
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gravatar for ptgriffin
24 days ago by
ptgriffin0
ptgriffin0 wrote:

How can I incorporate the Morenos-Mateo (CRISPRscan) gRNA efficiency scores into your software? I need to use T7 IVT and these scores work better in that case than Doench scores.

Thanks!

crisprseek • 59 views
ADD COMMENTlink modified 24 days ago by Julie Zhu4.1k • written 24 days ago by ptgriffin0
Answer: CRISPRseek - adding CRISPRscan score
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gravatar for Julie Zhu
24 days ago by
Julie Zhu4.1k
United States
Julie Zhu4.1k wrote:

Hi Patrick,

Please download the latest dev version of CRISPRseek (>= Version: 1.27.5), which has the CRISPRscan gRNA efficacy algorithm implemented. You can download the latest version using git clone git@git.bioconductor.org:packages/CRISPRseek or wait for it to be propagated to http://bioconductor.org/packages/devel/bioc/html/CRISPRseek.html.

Please let me know if it works as expected. Thanks!

Best wishes, Julie

ADD COMMENTlink modified 21 days ago • written 24 days ago by Julie Zhu4.1k
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