Extract sample information from own BAM files using SGSeq
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anjanhazra • 0
@anjanhazra-22513
Last seen 22 months ago

I have a set of BAM files that are mapped through a splice aware program. Please help to extract the sample information from my own BAM files through the getBamInfo() command.

SGSeq • 195 views
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@leonard-goldstein-6845
Last seen 12 months ago
United States

Please read the help page for getBamInfo and SGSeq vignette section 2. Note that your BAM files must contain the custom tag 'XS' for spliced reads. If you are looking for help with a particular problem or error you need to provide more information (error message, sessionInfo() output, aligner information etc.)

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