Hi all, I am trying to analyze a pretty old Affymetrix dataset that has been published on Array Express. I had trouble finding the raw data and I had my supervisor contacted the Array Express team and finally got the raw data. I have analyzed many datasets of Affymetrix platforms. So far I have seen the input files as .CEL or CHP files for Affymetrix. But wit respect to this particular dataset, I have received the .TCT files for 8 samples with two columns "probe" and "signal". Is there any particular package that I could read the files and analyze the dataset?
I would really appreciate your help!!!