Good morning, I saw this massage
r: vector memory exhausted (limit reached?) In addition: Warning message: In fread(f, header = TRUE, sep = "\t", stringsAsFactors = FALSE, : Previous fread() session was not cleaned up properly. Cleaned up ok at the beginning of this fread() call. Killed after 1 m
After using the command :
GDCprepare(query, save =TRUE ,
save.filename = "./Processed_Data/Methylation.rda",
directory = "./",
summarizedExperiment = FALSE)
When I tried to prepare the methylation data that I already downloaded using the TCGAbiolinks package, any advice to solve this problem or better package to apply to download and prepare the TCGA data??
Thanks in advance.