TCGA ATAC-sec in MultiAssayExperiment format
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@mariozanfardino-15232
Last seen 2.5 years ago
Naples (Italy)

Are there a method to download atac-sec data from TCGA in a MultiAssayExperiment object?

Thank you!

MultiAssayExperiment • 375 views
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I'm not aware of ATAC-seq data generated by the TCGA project, can you point to any? I might be able to advise then on how to integrate it with the MultiAssayExperiment objects provided by curatedTCGAData.

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You are right! there are only BAM controlled files. Sorry!

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