Problems with library(cummeRbund)
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@akankshabafna-23275
Last seen 10 months ago
United Kingdom

Hi, I am trying to use package cummeRbund to study differential gene expression in my sample groups of RNASEQ data On running the standard command :

cuff_data <- readCufflinks('WTCHG_diff_out2')
> mygene <- getGene(cuff_data, 'per')
I get below error 
No gene set returned (Gene might not be in database?)
Error in validObject(.Object) : invalid class "CuffGene" object: FALSE

Please suggest.

cummeRbund • 223 views
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