Conversion of RefSeq data to chromosomal position
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heiko_kin ▴ 50
@heiko_kin-23266
Last seen 8 months ago

Dear Community,

I am working on a large scale project which needs generation of missende variants an subsequent conversion of RefSeq data to its referring chromosomal position. I am currently retrieving the RefSeq sequence in R using biomaRt and create a .txt file that I am then uploading separately to mutalyzer's batch position converter. The resulting file looks like this:

Sample file

However, I was wondering if there is a more direct way of getting this data? Or is there a command line to for R to upload data to mutalyzer?

Thanks so much for your help!

Heiko

RefSeq Chromosome Mutalyzer • 120 views
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