Question

unable to load DEGreport on rstudio after installation

0

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kavator ▴ 30

@kavator-22955

Last seen 14 months ago

Singapore

Hi everyone; i tried to load DEGreport onto my rstudio (ver3.6.1) on windows- w internet connection on. installation was successful with both

install.packages("DEGreport", dependencies = TRUE)

and

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("DEGreport")

but there was an error message

Error: package or namespace load failed for 'DEGreport' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
namespace 'tibble' 2.1.3 is already loaded, but >= 3.0.0 is required

and i wasnt able to load i tried to solve it by unloading and updating tibble and restarting Rstudio but to no avail. Will appreciate some advice.

DEGreport • 2.4k views

ADD COMMENT • link updated 4.0 years ago by Martin Morgan 25k • written 4.0 years ago by kavator ▴ 30

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Please always use BiocManager::install() to install Bioconductor (and other!) packages.

After updating tibble, I have

> packageVersion("tibble")
[1] '3.0.1'

If you have the same version, then is the message that you report above

Error: package or namespace load failed for 'DEGreport' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
 namespace 'tibble' 2.1.3 is already loaded, but >= 3.0.0 is required

still being produced, or is there a different message?

ADD REPLY • link 4.0 years ago Martin Morgan 25k

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Hi Martin I managed to solve the problem. Turns out it's just R trying to convince me to update R and Rstudio! Therefore, tibble was affected

ADD REPLY • link 4.0 years ago kavator ▴ 30