Deseq2 how to get input data for plotCounts for a single gene
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sunthomas • 0
@sunthomas-23462
Last seen 3.9 years ago

Hi there,

I was able to successfully execute plotCounts(dds2tumor, gene="FGFR4", intgroup ="tumorsite_origin"). The graph shows me all the individual datapoints. But how do I get the values of each individual datapoint?

plotCounts

Thanks!

deseq2 plotcounts • 919 views
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@mikelove
Last seen 11 hours ago
United States

Check the vignette “Access to all calculated values”.

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