Unable to install BiocManager
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anamarija ▴ 10
@anamarija-22787
Last seen 21 months ago

Hello,

I am using R 3.6.3

And I am trying to install BiocManager via:

if (!requireNamespace("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install(version = "3.10")

> if (!requireNamespace("BiocManager", quietly = TRUE))
+     install.packages("BiocManager")
> BiocManager::install(version = "3.10")
Bioconductor version 3.10 (BiocManager 1.30.10), R 3.6.3 (2020-02-29)
Installation path not writeable, unable to update packages: boot, class,
  KernSmooth, lattice, MASS, nlme, nnet, spatial, survival

Can you please advise, Ana

BiocManager • 509 views
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@martin-morgan-1513
Last seen 18 days ago
United States

This

Bioconductor version 3.10 (BiocManager 1.30.10), R 3.6.3 (2020-02-29)

indicates that you have successfully installed BiocManager -- you're good to go!

This

Installation path not writeable, unable to update packages: boot, class,
  KernSmooth, lattice, MASS, nlme, nnet, spatial, survival

indicates that some packages have been installed under a different account, usually an 'administrator' account. These are so-called 'recommended' packages; you can ignore the warning, or you can re-install R but do not use an administrator account to do so.

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@anasjamshed1994-23934
Last seen 4 months ago
Pakistan

you required admin permission to install this

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1
Entering edit mode

This is wrong. You don't need admin privileges. You can create a new lib path in your home directory and install packages there.

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