Unable to download hg19.generanges as part of DMRcatedata package
I have been unable to download the entire hg19.generanges for DMRcatedata on a mac at work. I can download it at home, but my mac at work has more memory, so I would like to use the work mac.
Here is my session (I has to eliminate part of the sessionInfo() to stay within character limit. Please raise the character limit):
> results.ranges <- extractRanges(DMRs, genome = "hg19") snapshotDate(): 2020-04-27 see ?DMRcatedata and browseVignettes('') for documentation downloading 1 resources retrieving 1 resource | | 0%Error: failed to load resource name: EH3132 title: hg19.generanges reason: 1 resources failed to download In addition: Warning messages: 1: download failed web resource path: 'https://experimenthub.bioconductor.org/fetch/3148' local file path: '/Users/friedman/Library/Caches/ExperimentHub/17d25be40bc3_3148' reason: transfer closed with 900409 bytes remaining to read 2: bfcadd() failed; resource removed rid: BFC15 fpath: 'https://experimenthub.bioconductor.org/fetch/3148' reason: download failed 3: download failed hub path: 'https://experimenthub.bioconductor.org/fetch/3148' cache resource: 'EH3132 : 3148' reason: bfcadd() failed; see warnings() > sessionInfo() R version 4.0.2 (2020-06-22) Platform: x86_64-apple-darwin17.0 (64-bit) Running under: macOS Mojave 10.14 Matrix products: default BLAS: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRblas.dylib LAPACK: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib locale:  en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 attached base packages:  stats4 parallel stats graphics grDevices utils datasets methods base other attached packages:  DMRcatedata_2.6.0 ExperimentHub_1.14.2  AnnotationHub_2.20.2 BiocFileCache_1.12.1  dbplyr_1.4.4 IlluminaHumanMethylation450kanno.ilmn12.hg19_0.6.0  ggplot2_3.3.2 clusterProfiler_3.16.1  xlsx_0.6.3 ChAMP_2.18.2  DT_0.15 IlluminaHumanMethylationEPICmanifest_0.3.0  Illumina450ProbeVariants.db_1.24.0 FEM_3.15.0  graph_1.66.0 org.Hs.eg.db_3.11.4  impute_1.62.0 igraph_1.2.5  corrplot_0.84 marray_1.66.0  limma_3.44.3 Matrix_1.2-18  AnnotationDbi_1.50.3 ChAMPdata_2.20.0  DMRcate_2.2.2 minfi_1.34.0  bumphunter_1.30.0 locfit_1.5-9.4  iterators_1.0.12 foreach_1.5.0  Biostrings_2.56.0 XVector_0.28.0  SummarizedExperiment_1.18.2 DelayedArray_0.14.1  matrixStats_0.56.0 Biobase_2.48.0  GenomicRanges_1.40.0 GenomeInfoDb_1.24.2  IRanges_2.22.2 S4Vectors_0.26.1  BiocGenerics_0.34.0 l >
Thanks and best wishes, Rich Richard Friedman, Columbia Univeristy