I am trying to run DMRcate with a dataset downloaded from a paper. This dataset consist, instead of a set of probe names and their corresponding beta values, of a set of genomic positions and their corresponding beta values.
When I run
cpg.annotate I have to specify
arraytype = "EPIC" or "450k". But these data come from none of them. So, is it possible to indicate just genomic positions to cog.annotate and get an annotation to find differentially methylated regions?