limma missing files
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Dick Beyer ★ 1.4k
@dick-beyer-26
Last seen 6.8 years ago
Are there plans to include the example files refered to in the limma documentation? Specifically: Example. ApoAI Knockout Data In this example we assume that the data is available as an RG list in the data file ApoAI.RData. Example. Weaver Mutant Data In this example we assume that data is available as an RG list. Example. Bob Mutant Data In this example we assume that the data is available as an RG list. Thanks much, Dick ********************************************************************** ********* Richard P. Beyer, Ph.D. University of Washington Tel.:(206) 616 7378 Env. & Occ. Health Sci. , Box 354695 Fax: (206) 685 4696 4225 Roosevelt Way NE, # 100 Seattle, WA 98105-6099
weaver weaver • 447 views
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@gordon-smyth
Last seen 1 hour ago
WEHI, Melbourne, Australia
At 01:46 PM 7/05/2003, Dick Beyer wrote: >Are there plans to include the example files refered to in the limma >documentation? Specifically: Basically, no I don't plan to include the data sets as part of the package, because it would increase the size of the library by more than an order of magnitude. However you can download all the data sets, exactly as used in the limma User's Guide, from the URL: http://bioinf.wehi.edu.au/marray/genstat2002/ Best wishes Gordon >Example. ApoAI Knockout Data >In this example we assume that the data is available as an RG list in the >data file ApoAI.RData. > >Example. Weaver Mutant Data >In this example we assume that data is available as an RG list. > >Example. Bob Mutant Data >In this example we assume that the data is available as an RG list. > >Thanks much, >Dick >********************************************************************* ********** >Richard P. Beyer, Ph.D. University of Washington >Tel.:(206) 616 7378 Env. & Occ. Health Sci. , Box 354695 >Fax: (206) 685 4696 4225 Roosevelt Way NE, # 100 > Seattle, WA 98105-6099 ---------------------------------------------------------------------- ----------------- Dr Gordon K Smyth, Senior Research Scientist, Bioinformatics, Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, Vic 3050, Australia Tel: (03) 9345 2326, Fax (03) 9347 0852, Email: smyth@wehi.edu.au, www: http://www.statsci.org
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Thanks Gordon, that's just what I was looking for. Cheers, Dick ********************************************************************** ********* Richard P. Beyer, Ph.D. University of Washington Tel.:(206) 616 7378 Env. & Occ. Health Sci. , Box 354695 Fax: (206) 685 4696 4225 Roosevelt Way NE, # 100 Seattle, WA 98105-6099 ********************************************************************** ********* On Wed, 7 May 2003, Gordon Smyth wrote: > At 01:46 PM 7/05/2003, Dick Beyer wrote: > >Are there plans to include the example files refered to in the limma > >documentation? Specifically: > > Basically, no I don't plan to include the data sets as part of the package, > because it would increase the size of the library by more than an order of > magnitude. However you can download all the data sets, exactly as used in > the limma User's Guide, from the URL: > > http://bioinf.wehi.edu.au/marray/genstat2002/ > > Best wishes > Gordon > > >Example. ApoAI Knockout Data > >In this example we assume that the data is available as an RG list in the > >data file ApoAI.RData. > > > >Example. Weaver Mutant Data > >In this example we assume that data is available as an RG list. > > > >Example. Bob Mutant Data > >In this example we assume that the data is available as an RG list. > > > >Thanks much, > >Dick > >******************************************************************* ************ > >Richard P. Beyer, Ph.D. University of Washington > >Tel.:(206) 616 7378 Env. & Occ. Health Sci. , Box 354695 > >Fax: (206) 685 4696 4225 Roosevelt Way NE, # 100 > > Seattle, WA 98105-6099 > > -------------------------------------------------------------------- ------------------- > Dr Gordon K Smyth, Senior Research Scientist, Bioinformatics, > Walter and Eliza Hall Institute of Medical Research, > 1G Royal Parade, Parkville, Vic 3050, Australia > Tel: (03) 9345 2326, Fax (03) 9347 0852, > Email: smyth@wehi.edu.au, www: http://www.statsci.org > >
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