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heatmap_2

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Ron Ophir ▴ 270

@ron-ophir-1010

Last seen 9.6 years ago

Hi, One of the features of heatmap is to set Colv or Rowv to NA if I don't wont to perform clustering on columns or rows respectively. This option does not exist in heatmap_2. Is there another way to show columns or rows cluster solely? Thanks, Ron

Clustering Clustering • 775 views

ADD COMMENT • link updated 17.6 years ago by Marc Saric ▴ 70 • written 17.6 years ago by Ron Ophir ▴ 270

score 0 · Answer 1 · 2006-09-19

Ron Ophir wrote: > Hi, > One of the features of heatmap is to set Colv or Rowv to NA if I don't > wont to perform clustering on columns or rows respectively. This option > does not exist in heatmap_2. Is there another way to show columns or > rows cluster solely? > Thanks, > Ron As far as I know you can provide an arbitrary vector for ordering columns or rows, which can be misused to leave them in input order: ... Colv = Vector, Rowv = Vector, ... The most recent version of heatmap_2 seems to have a problem with this though (or I am having a problem understanding the command syntax). This did work in R 2.2.1 and it does not in R 2.3.1. -- Bye, Marc Saric