Limma - error when using duplicateCorrelation
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@gordon-smyth
Last seen 52 minutes ago
WEHI, Melbourne, Australia
Dear Jakob, I've never seen this error, despite using duplicateCorrelation() often. Please provide a reproducible example so that the error can be tracked down. Best wishes Gordon > Date: Tue, 10 Oct 2006 09:06:20 +0200 > From: "Jakob Hedegaard" <jakob.hedegaard at="" agrsci.dk=""> > Subject: [BioC] Limma - error when using duplicateCorrelation > To: <bioconductor at="" stat.math.ethz.ch=""> > > Hi List > > When using duplicateCorrelation in Limma I am receiving the following error: > >> cor <- duplicateCorrelation(MA, design=design, ndups=2, weights=MA$weights) > Error in La.svd(QtZ, nu = mq, nv = 0) : error code 1 from Lapack routine 'dgesdd' > > - any suggestions would be appreciated.... > >> sessionInfo() > Version 2.3.1 (2006-06-01) > x86_64-unknown-linux-gnu > > attached base packages: > [1] "methods" "stats" "graphics" "grDevices" "utils" "datasets" > [7] "base" > > other attached packages: > statmod limma > "1.2.4" "2.7.10" > > > > Best regards > > Jakob Hedegaard > Project scientist > > > > Danish Institute of Agricultural Sciences > Research Centre Foulum > Dept. of Genetics and Biotechnology > Blichers All? 20, P.O. BOX 50 > DK-8830 Tjele > > Phone: +45 8999 1900 > Direct: +45 8999 1363 > E-mail: Jakob.Hedegaard at agrsci.dk <mailto:jakob.hedegaard at="" agrsci.dk=""> > Web: www.agrsci.org <http: www.agrsci.org=""/>
Genetics limma Genetics limma • 590 views
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