Documentation needed for Oligo package
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@aashish-dattani-2215
Last seen 9.6 years ago
Hi everyone, I am doing a project on determining allele specific copy numbers. I have downloaded the Oligo package and installed it on the Windows R environment. But being new to R, I have no idea how to run it. And there is not documentaiton given anywhere along with it. Is there any way i can start the execution? Is there any other package that is better for finding allele specific copy numbers? I desperately want to do this project. Any help in this regard will be appreciated. Thanking you, Aashish Dattani.
oligo oligo • 760 views
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@benilton-carvalho-1375
Last seen 4.0 years ago
Brazil/Campinas/UNICAMP
The oligo package won't give you allele specific copy numbers right now. It will give you average intensities which can be used later for copy number. A vignette should be appearing in the next days on the BioC servers. In the meantime, you can take a look at: http://www.biostat.jhsph.edu/~bcarvalh/oligo.pdf best, b On Jun 14, 2007, at 1:17 AM, Aashish Dattani wrote: > Hi everyone, > I am doing a project on determining allele specific copy numbers. I > have downloaded the Oligo package and installed it on the Windows R > environment. > But being new to R, I have no idea how to run it. And there is not > documentaiton given anywhere along with it. Is there any way i can > start the execution? Is there any other package that is better for > finding allele specific copy numbers? > > I desperately want to do this project. Any help in this regard will be > appreciated. > Thanking you, > Aashish Dattani. > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/ > gmane.science.biology.informatics.conductor
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