how to see the content of a bioconductor function?
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carol white ▴ 680
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Benjamin Otto ▴ 830
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Last seen 9.6 years ago
Hi Carol, Try >getMethods(xval) Cheers, Benjamin -----Urspr?ngliche Nachricht----- Von: bioconductor-bounces at stat.math.ethz.ch [mailto:bioconductor-bounces at stat.math.ethz.ch] Im Auftrag von carol white Gesendet: Thursday, July 05, 2007 1:20 PM An: Holger Schwender; James Anderson Cc: bioconductor at stat.math.ethz.ch Betreff: Re: [BioC] how to see the content of a bioconductor function? Hi all, How is it possible to see the content of xval function? > xval standardGeneric for "xval" defined from package "MLInterfaces" function (data, classLab, proc, xvalMethod, group, indFun, niter, fsFun = NULL, fsNum = NULL, decreasing = TRUE, cluster = NULL, ...) standardGeneric("xval") <environment: 0xa419950=""> Methods may be defined for arguments: data, classLab, proc, xvalMethod, group, indFun, niter, fsFun, fsNum, decreasing, cluster look forward to your reply --------------------------------- [[alternative HTML version deleted]] _______________________________________________ Bioconductor mailing list Bioconductor at stat.math.ethz.ch https://stat.ethz.ch/mailman/listinfo/bioconductor Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor -- Pflichtangaben gem?? Gesetz ?ber elektronische Handelsregister und Genossenschaftsregister sowie das Unternehmensregister (EHUG): Universit?tsklinikum Hamburg-Eppendorf K?rperschaft des ?ffentlichen Rechts Gerichtsstand: Hamburg Vorstandsmitglieder: Prof. Dr. J?rg F. Debatin (Vorsitzender) Dr. Alexander Kirstein Ricarda Klein Prof. Dr. Dr. Uwe Koch-Gromus
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Actually, according to the S4 gurus, the correct method is showMethods(xval, includeDefs=TRUE) The getMethods() function is primarily designed for programmatic access to the methods. It is often useful to add the 'classes' argument to only get the method you are interested in. Best, Jim Benjamin Otto wrote: > Hi Carol, > > Try > >> getMethods(xval) > > Cheers, > > Benjamin > > > -----Urspr?ngliche Nachricht----- > Von: bioconductor-bounces at stat.math.ethz.ch > [mailto:bioconductor-bounces at stat.math.ethz.ch] Im Auftrag von carol white > Gesendet: Thursday, July 05, 2007 1:20 PM > An: Holger Schwender; James Anderson > Cc: bioconductor at stat.math.ethz.ch > Betreff: Re: [BioC] how to see the content of a bioconductor function? > > Hi all, > How is it possible to see the content of xval function? > > >> xval > standardGeneric for "xval" defined from package "MLInterfaces" > > function (data, classLab, proc, xvalMethod, group, indFun, niter, > fsFun = NULL, fsNum = NULL, decreasing = TRUE, cluster = NULL, > ...) > standardGeneric("xval") > <environment: 0xa419950=""> > Methods may be defined for arguments: data, classLab, proc, xvalMethod, > group, indFun, niter, fsFun, fsNum, decreasing, cluster > > look forward to your reply > > > --------------------------------- > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: > http://news.gmane.org/gmane.science.biology.informatics.conductor > > > -- James W. MacDonald, M.S. Biostatistician Affymetrix and cDNA Microarray Core University of Michigan Cancer Center 1500 E. Medical Center Drive 7410 CCGC Ann Arbor MI 48109 734-647-5623 ********************************************************** Electronic Mail is not secure, may not be read every day, and should not be used for urgent or sensitive issues.
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