SNP chips
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@yogi-sundaravadanam-2312
Last seen 9.6 years ago
Hi all, I was wondering if there were packages in bioconductor that access the quality of Affymetrix SNP chips. Thanks heaps. Cheers Yogi [[alternative HTML version deleted]]
SNP SNP • 954 views
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@marco-zucchelli-1987
Last seen 9.6 years ago
affyQCReport On Wed, Aug 20, 2008 at 3:53 AM, Yogi Sundaravadanam < yogi.sundaravadanam@agrf.org.au> wrote: > Hi all, > > > > I was wondering if there were packages in bioconductor that access the > quality of Affymetrix SNP chips. > > Thanks heaps. > > > > > > Cheers > > Yogi > > > > > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor@stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: > http://news.gmane.org/gmane.science.biology.informatics.conductor > [[alternative HTML version deleted]]
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Hi, Actually the basic code is in simpleaffy, and both arrayQualityMetrics and affyQCReport make use of it (I suggest using the former) best wishes Robert marco zucchelli wrote: > affyQCReport > > On Wed, Aug 20, 2008 at 3:53 AM, Yogi Sundaravadanam < > yogi.sundaravadanam at agrf.org.au> wrote: > >> Hi all, >> >> >> >> I was wondering if there were packages in bioconductor that access the >> quality of Affymetrix SNP chips. >> >> Thanks heaps. >> >> >> >> >> >> Cheers >> >> Yogi >> >> >> >> >> >> [[alternative HTML version deleted]] >> >> _______________________________________________ >> Bioconductor mailing list >> Bioconductor at stat.math.ethz.ch >> https://stat.ethz.ch/mailman/listinfo/bioconductor >> Search the archives: >> http://news.gmane.org/gmane.science.biology.informatics.conductor >> > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor > -- Robert Gentleman, PhD Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M2-B876 PO Box 19024 Seattle, Washington 98109-1024 206-667-7700 rgentlem at fhcrc.org
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