install BeadExplorer
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Yuan Jian ▴ 250
@yuan-jian-2603
Last seen 8.8 years ago
Hi, when I tried to instal BeadExplorer, I got error: > source("http://bioconductor.org/biocLite.R") > biocLite("BeadExplorer") Running biocinstall version 2.2.10 with R version 2.7.2 Your version of R requires version 2.2 of BioConductor. Warning message: package ¡BeadExplorer¢ is not available > sessionInfo() R version 2.7.2 (2008-08-25) i386-pc-mingw32 locale: LC_COLLATE=English_Australia.1252;LC_CTYPE=English_Australia.1252;LC_M ONETARY=English_Australia.1252;LC_NUMERIC=C;LC_TIME=English_Australia. 1252 attached base packages: [1] stats     graphics  grDevices utils     datasets  methods   base loaded via a namespace (and not attached): [1] tools_2.7.2 > [[alternative HTML version deleted]]
BeadExplorer BeadExplorer • 1.0k views
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@sean-davis-490
Last seen 3 months ago
United States
On Tue, Sep 23, 2008 at 9:02 PM, Yuan Jian <jayuan2008 at="" yahoo.com=""> wrote: > Hi, > when I tried to instal BeadExplorer, I got error: >> source("http://bioconductor.org/biocLite.R") >> biocLite("BeadExplorer") > Running biocinstall version 2.2.10 with R version 2.7.2 > Your version of R requires version 2.2 of BioConductor. > Warning message: > package ?BeadExplorer? is not available > >> sessionInfo() > R version 2.7.2 (2008-08-25) > i386-pc-mingw32 > locale: > LC_COLLATE=English_Australia.1252;LC_CTYPE=English_Australia.1252;LC _MONETARY=English_Australia.1252;LC_NUMERIC=C;LC_TIME=English_Australi a.1252 > attached base packages: > [1] stats graphics grDevices utils datasets methods base > loaded via a namespace (and not attached): > [1] tools_2.7.2 Yes. It looks like the last version of BeadExplorer was included with bioconductor 2.1. Sean
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Thanks, Sean how can I downgrade to bioconductor 2.1? --- On Wed, 9/24/08, Sean Davis <sdavis2@mail.nih.gov> wrote: From: Sean Davis <sdavis2@mail.nih.gov> Subject: Re: [BioC] install BeadExplorer To: jayuan2008@yahoo.com Cc: bioconductor@stat.math.ethz.ch Date: Wednesday, September 24, 2008, 3:08 AM On Tue, Sep 23, 2008 at 9:02 PM, Yuan Jian <jayuan2008@yahoo.com> wrote: > Hi, > when I tried to instal BeadExplorer, I got error: >> source("http://bioconductor.org/biocLite.R") >> biocLite("BeadExplorer") > Running biocinstall version 2.2.10 with R version 2.7.2 > Your version of R requires version 2.2 of BioConductor. > Warning message: > package �BeadExplorer� is not available > >> sessionInfo() > R version 2.7.2 (2008-08-25) > i386-pc-mingw32 > locale: > LC_COLLATE=English_Australia.1252;LC_CTYPE=English_Australia.1252;LC_M ONETARY=English_Australia.1252;LC_NUMERIC=C;LC_TIME=English_Australia. 1252 > attached base packages: > [1] stats graphics grDevices utils datasets methods base > loaded via a namespace (and not attached): > [1] tools_2.7.2 Yes. It looks like the last version of BeadExplorer was included with bioconductor 2.1. Sean [[alternative HTML version deleted]]
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Hi, The maintainer of BeadExplorer seems to have moved and not left a forwarding email address, so it won't be included in the next release, unless he contacts us. You can downgrade to a previous release by obtaining and installing the appropriate version of R (2.6.2 for BioC 2.1) and then biocLite should install the appropriate packages. Robert Yuan Jian wrote: > Thanks, Sean > how can I downgrade to bioconductor 2.1? > > --- On Wed, 9/24/08, Sean Davis <sdavis2 at="" mail.nih.gov=""> wrote: > > From: Sean Davis <sdavis2 at="" mail.nih.gov=""> > Subject: Re: [BioC] install BeadExplorer > To: jayuan2008 at yahoo.com > Cc: bioconductor at stat.math.ethz.ch > Date: Wednesday, September 24, 2008, 3:08 AM > > On Tue, Sep 23, 2008 at 9:02 PM, Yuan Jian <jayuan2008 at="" yahoo.com=""> wrote: >> Hi, >> when I tried to instal BeadExplorer, I got error: >>> source("http://bioconductor.org/biocLite.R") >>> biocLite("BeadExplorer") >> Running biocinstall version 2.2.10 with R version 2.7.2 >> Your version of R requires version 2.2 of BioConductor. >> Warning message: >> package ?BeadExplorer? is not available >> >>> sessionInfo() >> R version 2.7.2 (2008-08-25) >> i386-pc-mingw32 >> locale: >> > LC_COLLATE=English_Australia.1252;LC_CTYPE=English_Australia.1252;LC _MONETARY=English_Australia.1252;LC_NUMERIC=C;LC_TIME=English_Australi a.1252 >> attached base packages: >> [1] stats graphics grDevices utils datasets methods base >> loaded via a namespace (and not attached): >> [1] tools_2.7.2 > > Yes. It looks like the last version of BeadExplorer was included with > bioconductor 2.1. > > Sean > > > > > [[alternative HTML version deleted]] > > > > -------------------------------------------------------------------- ---- > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor -- Robert Gentleman, PhD Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M2-B876 PO Box 19024 Seattle, Washington 98109-1024 206-667-7700 rgentlem at fhcrc.org
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