Clone ID to Gene symbol mapping for Hs?
1
0
Entering edit mode
Tim Smith ★ 1.1k
@tim-smith-1532
Last seen 9.6 years ago
Hi, I was trying to map clone IDs to gene symbols for microarray data. I looked at the org.Hs.eg.db package, but this doesn't appear to have the mapping. Or should I be using some other package? thanks! [[alternative HTML version deleted]]
Microarray Microarray • 1.4k views
ADD COMMENT
0
Entering edit mode
@sean-davis-490
Last seen 3 months ago
United States
On Thu, Nov 13, 2008 at 2:19 PM, Tim Smith <tim_smith_666@yahoo.com> wrote: > Hi, > > I was trying to map clone IDs to gene symbols for microarray data. I looked > at the org.Hs.eg.db package, but this doesn't appear to have the mapping. > > Or should I be using some other package? Hi, Tim. There is not a package for doing this as far as I know. Look at Stanford Source: http://smd.stanford.edu/cgi-bin/source/sourceSearch If you feel that you need to do this within R, the only mapping that I know of is UniGene. You could parse the .dat files for your organism and pull these out, but the file format is not trivial. Sean [[alternative HTML version deleted]]
ADD COMMENT

Login before adding your answer.

Traffic: 946 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6