makecdfenv crashes
1
0
Entering edit mode
Skewes,Aaron ▴ 60
@skewesaaron-3164
Last seen 8.2 years ago
Hi, I am attempting to make a CDF package for Affy GenomeWideSNP 6.0 platform using makecdfenv, and it crashes. Any suggestions? Thanks, Aaron > library("makecdfenv") Loading required package: Biobase Loading required package: tools Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()'. To cite Bioconductor, see 'citation("Biobase")' and for packages 'citation(pkgname)'. Loading required package: affy Loading required package: affyio Loading required package: preprocessCore > make.cdf.package("GenomeWideSNP_6.Full.cdf", species = "Human") *** glibc detected *** /usr/local/lib64/R/bin/exec/R: malloc(): memory corruption: 0x0000000001149120 *** ======= Backtrace: ========= /lib64/libc.so.6[0x36c0a71cd1] /lib64/libc.so.6(__libc_malloc+0x7d)[0x36c0a72e8d] /usr/local/lib64/R/bin/exec/R(Rf_allocVector+0x5de)[0x41a26e] /usr/local/lib64/R/bin/exec/R(Rf_allocMatrix+0x6e)[0x4cc47e] /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/affyio/libs/affyio.so(ReadCDFFile+0x1cb)[0x2b9550e4cb8b] /usr/local/lib64/R/bin/exec/R[0x51a286] /usr/local/lib64/R/bin/exec/R(Rf_eval+0x5b1)[0x5409d1] /usr/local/lib64/R/bin/exec/R[0x544672] /usr/local/lib64/R/bin/exec/R(Rf_eval+0x3de)[0x5407fe] /usr/local/lib64/R/bin/exec/R[0x541430] /usr/local/lib64/R/bin/exec/R(Rf_eval+0x3de)[0x5407fe] /usr/local/lib64/R/bin/exec/R(Rf_eval+0x3de)[0x5407fe] /usr/local/lib64/R/bin/exec/R[0x541430] /usr/local/lib64/R/bin/exec/R(Rf_eval+0x3de)[0x5407fe] /usr/local/lib64/R/bin/exec/R(Rf_applyClosure+0x270)[0x542990] /usr/local/lib64/R/bin/exec/R(Rf_eval+0x2c9)[0x5406e9] /usr/local/lib64/R/bin/exec/R[0x544672] /usr/local/lib64/R/bin/exec/R(Rf_eval+0x3de)[0x5407fe] /usr/local/lib64/R/bin/exec/R[0x541430] /usr/local/lib64/R/bin/exec/R(Rf_eval+0x3de)[0x5407fe] /usr/local/lib64/R/bin/exec/R(Rf_applyClosure+0x270)[0x542990] /usr/local/lib64/R/bin/exec/R(Rf_eval+0x2c9)[0x5406e9] /usr/local/lib64/R/bin/exec/R(Rf_ReplIteration+0x16e)[0x4144ce] /usr/local/lib64/R/bin/exec/R(tan+0x30f0)[0x4147c8] /usr/local/lib64/R/bin/exec/R(run_Rmainloop+0x40)[0x414a90] /usr/local/lib64/R/bin/exec/R(main+0x18)[0x412578] /lib64/libc.so.6(__libc_start_main+0xf4)[0x36c0a1d8b4] /usr/local/lib64/R/bin/exec/R(sinh+0x61)[0x412479] ======= Memory map: ======== 00400000-0065c000 r-xp 00000000 68:02 9428372 /usr/local/lib64/R/bin/exec/R 0085c000-0086b000 rw-p 0025c000 68:02 9428372 /usr/local/lib64/R/bin/exec/R 0086b000-00902000 rw-p 0086b000 00:00 0 00eaa000-267cf000 rw-p 00eaa000 00:00 0 36a4000000-36a4035000 r-xp 00000000 68:02 6580119 /usr/lib64/libreadline.so.5.1 36a4035000-36a4234000 ---p 00035000 68:02 6580119 /usr/lib64/libreadline.so.5.1 36a4234000-36a423c000 rw-p 00034000 68:02 6580119 /usr/lib64/libreadline.so.5.1 36a423c000-36a423d000 rw-p 36a423c000 00:00 0 36a8000000-36a804f000 r-xp 00000000 68:02 6580023 /usr/lib64/libncurses.so.5.5 36a804f000-36a824e000 ---p 0004f000 68:02 6580023 /usr/lib64/libncurses.so.5.5 36a824e000-36a825c000 rw-p 0004e000 68:02 6580023 /usr/lib64/libncurses.so.5.5 36a825c000-36a825d000 rw-p 36a825c000 00:00 0 36c0600000-36c061a000 r-xp 00000000 68:02 1735295 /lib64/ld-2.5.so 36c081a000-36c081b000 r--p 0001a000 68:02 1735295 /lib64/ld-2.5.so 36c081b000-36c081c000 rw-p 0001b000 68:02 1735295 /lib64/ld-2.5.so 36c0a00000-36c0b4a000 r-xp 00000000 68:02 1735296 /lib64/libc-2.5.so 36c0b4a000-36c0d49000 ---p 0014a000 68:02 1735296 /lib64/libc-2.5.so 36c0d49000-36c0d4d000 r--p 00149000 68:02 1735296 /lib64/libc-2.5.so 36c0d4d000-36c0d4e000 rw-p 0014d000 68:02 1735296 /lib64/libc-2.5.so 36c0d4e000-36c0d53000 rw-p 36c0d4e000 00:00 0 36c0e00000-36c0e02000 r-xp 00000000 68:02 1735298 /lib64/libdl-2.5.so 36c0e02000-36c1002000 ---p 00002000 68:02 1735298 /lib64/libdl-2.5.so 36c1002000-36c1003000 r--p 00002000 68:02 1735298 /lib64/libdl-2.5.so 36c1003000-36c1004000 rw-p 00003000 68:02 1735298 /lib64/libdl-2.5.so 36c1200000-36c1282000 r-xp 00000000 68:02 1735306 /lib64/libm-2.5.so 36c1282000-36c1481000 ---p 00082000 68:02 1735306 /lib64/libm-2.5.so 36c1481000-36c1482000 r--p 00081000 68:02 1735306 /lib64/libm-2.5.so 36c1482000-36c1483000 rw-p 00082000 68:02 1735306 /lib64/libm-2.5.so 36c1600000-36c1615000 r-xp 00000000 68:02 1735297 /lib64/libpthread-2.5.so 36c1615000-36c1814000 ---p 00015000 68:02 1735297 /lib64/libpthread-2.5.so 36c1814000-36c1815000 r--p 00014000 68:02 1735297 /lib64/libpthread-2.5.so 36c1815000-36c1816000 rw-p 00015000 68:02 1735297 /lib64/libpthread-2.5.so 36c1816000-36c181a000 rw-p 36c1816000 00:00 0 36c1a00000-36c1a14000 r-xp 00000000 68:02 7405522 /usr/lib64/libz.so.1.2.3 36c1a14000-36c1c13000 ---p 00014000 68:02 7405522 /usr/lib64/libz.so.1.2.3 36c1c13000-36c1c14000 rw-p 00013000 68:02 7405522 /usr/lib64/libz.so.1.2.3 36c5e00000-36c5e0d000 r-xp 00000000 68:02 1735307 /lib64/libgcc_s-4.1.2-20080102.so.1 36c5e0d000-36c600d000 ---p 0000d000 68:02 1735307 /lib64/libgcc_s-4.1.2-20080102.so.1 36c600d000-36c600e000 rw-p 0000d000 68:02 1735307 /lib64/libgcc_s-4.1.2-20080102.so.1 2b954c2f8000-2b954c2fa000 rw-p 2b954c2f8000 00:00 0 2b954c2fa000-2b954c326000 r-xp 00000000 68:02 9428369 /usr/local/lib64/R/lib/libRblas.so 2b954c326000-2b954c525000 ---p 0002c000 68:02 9428369 /usr/local/lib64/R/lib/libRblas.so 2b954c525000-2b954c526000 rw-p 0002b000 68:02 9428369 /usr/local/lib64/R/lib/libRblas.so 2b954c54b000-2b954c5e1000 r-xp 00000000 68:02 7422570 /usr/lib64/libgfortran.so.1.0.0 2b954c5e1000-2b954c7e0000 ---p 00096000 68:02 7422570 /usr/lib64/libgfortran.so.1.0.0 2b954c7e0000-2b954c7e2000 rw-p 00095000 68:02 7422570 /usr/lib64/libgfortran.so.1.0.0 2b954c7e2000-2b954c7e5000 rw-p 2b954c7e2000 00:00 0 2b954c7e5000-2b954fdb7000 r--p 00000000 68:02 7404270 /usr/lib/locale/locale-archive 2b954fdb7000-2b954fe9c000 rw-p 2b954fdb7000 00:00 0 2b954fe9e000-2b954fee2000 rw-p 2b954fe9e000 00:00 0 2b954fee2000-2b954fee9000 r--s 00000000 68:02 7404775 /usr/lib64/gconv/gconv-modules.cache 2b954ff0e000-2b954ff18000 r-xp 00000000 68:02 1735036 /lib64/libnss_files-2.5.so 2b954ff18000-2b9550117000 ---p 0000a000 68:02 1735036 /lib64/libnss_files-2.5.so 2b9550117000-2b9550118000 r--p 00009000 68:02 1735036 /lib64/libnss_files-2.5.so 2b9550118000-2b9550119000 rw-p 0000a000 68:02 1735036 /lib64/libnss_files-2.5.so 2b9550119000-2b9550143000 rw-p 2b9550119000 00:00 0 2b9550143000-2b9550149000 r-xp 00000000 68:02 9430370 /usr/local/lib64/R/library/methods/libs/methods.so 2b9550149000-2b9550348000 ---p 00006000 68:02 9430370 /usr/local/lib64/R/library/methods/libs/methods.so 2b9550348000-2b9550349000 rw-p 00005000 68:02 9430370 /usr/local/lib64/R/library/methods/libs/methods.so 2b955034a000-2b95503aa000 rw-p 2b955034a000 00:00 0 2b95503aa000-2b95503ab000 r--p 00000000 68:02 9463067 /usr/local/lib64/R/share/locale/en/LC_MESSAGES/R.mo 2b95503ab000-2b95503ac000 r-xp 00000000 68:02 7404712 /usr/lib64/gconv/ISO8859-1.so 2b95503ac000-2b95505ac000 ---p 00001000 68:02 7404712 /usr/lib64/gconv/ISO8859-1.so 2b95505ac000-2b95505ae000 rw-p 00001000 68:02 7404712 /usr/lib64/gconv/ISO8859-1.so 2b95505ae000-2b95505ca000 r-xp 00000000 68:02 9433566 /usr/local/lib64/R/library/grDevices/libs/grDevices.so 2b95505ca000-2b95507ca000 ---p 0001c000 68:02 9433566 /usr/local/lib64/R/library/grDevices/libs/grDevices.so 2b95507ca000-2b95507cb000 rw-p 0001c000 68:02 9433566 /usr/local/lib64/R/library/grDevices/libs/grDevices.so 2b95507cb000-2b955082c000 r-xp 00000000 68:02 9460776 /usr/local/lib64/R/library/stats/libs/stats.so 2b955082c000-2b9550a2b000 ---p 00061000 68:02 9460776 /usr/local/lib64/R/library/stats/libs/stats.so 2b9550a2b000-2b9550a2e000 rw-p 00060000 68:02 9460776 /usr/local/lib64/R/library/stats/libs/stats.so 2b9550a2e000-2b9550a31000 r-xp 00000000 68:02 9432206 /usr/local/lib64/R/library/tools/libs/tools.so 2b9550a31000-2b9550c30000 ---p 00003000 68:02 9432206 /usr/local/lib64/R/library/tools/libs/tools.so 2b9550c30000-2b9550c31000 rw-p 00002000 68:02 9432206 /usr/local/lib64/R/library/tools/libs/tools.so 2b9550c31000-2b9550c36000 r-xp 00000000 68:05 5538407 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/Biobase/libs/Biobase.so 2b9550c36000-2b9550e35000 ---p 00005000 68:05 5538407 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/Biobase/libs/Biobase.so 2b9550e35000-2b9550e36000 rw-p 00004000 68:05 5538407 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/Biobase/libs/Biobase.so 2b9550e36000-2b9550e5d000 r-xp 00000000 68:05 5539021 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/affyio/libs/affyio.so 2b9550e5d000-2b955105c000 ---p 00027000 68:05 5539021 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/affyio/libs/affyio.so 2b955105c000-2b955105d000 rw-p 00026000 68:05 5539021 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/affyio/libs/affyio.so 2b955105d000-2b955107d000 r-xp 00000000 68:05 5538942 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/preprocessCore/libs/preprocessCore.so 2b955107d000-2b955127d000 ---p 00020000 68:05 5538942 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/preprocessCore/libs/preprocessCore.so 2b955127d000-2b955127e000 rw-p 00020000 68:05 5538942 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/preprocessCore/libs/preprocessCore.so 2b955127e000-2b95513e4000 r-xp 00000000 68:02 9428377 /usr/local/lib64/R/lib/libRlapack.so 2b95513e4000-2b95515e3000 ---p 00166000 68:02 9428377 /usr/local/lib64/R/lib/libRlapack.so 2b95515e3000-2b95515e5000 rw-p 00165000 68:02 9428377 /usr/local/lib64/R/lib/libRlapack.so 2b95515e5000-2b9551660000 rw-p 2b95515e5000 00:00 0 2b9551660000-2b9551668000 r-xp 00000000 68:05 5539060 /home/askewes/R/x86_64-unknown-linux-gnu-library/2.7/affy/libs/affy.so 2b9551668000-2b9551868000 ---p 00008000 68:05 5539060 /home/askewes/R/x86_64-unknown-linux-gnu-library/2.7/affy/libs/affy.so 2b9551868000-2b9551869000 rw-p 00008000 68:05 5539060 /home/askewes/R/x86_64-unknown-linux-gnu-library/2.7/affy/libs/affy.so 2b9551869000-2b955186c000 r-xp 00000000 68:05 5570789 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/makecdfenv/libs/makecdfenv.so 2b955186c000-2b9551a6b000 ---p 00003000 68:05 5570789 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/makecdfenv/libs/makecdfenv.so 2b9551a6b000-2b9551a6c000 rw-p 00002000 68:05 5570789 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/makecdfenv/libs/makecdfenv.so 2b9551a6c000-2b9551a6d000 rw-p 2b9551a6c000 00:00 0 2b9551a6e000-2b9558618000 rw-p 2b9551a6e000 00:00 0 2b955c000000-2b955c021000 rw-p 2b955c000000 00:00 0 2b955c021000-2b9560000000 ---p 2b955c021000 00:00 0 7fff5e795000-7fff5e7b2000 rw-p 7fff5e795000 00:00 0 [stack] ffffffffff600000-ffffffffffe00000 ---p 00000000 00:00 0 [vdso] Aborted [[alternative HTML version deleted]]
cdf affy makecdfenv cdf affy makecdfenv • 729 views
ADD COMMENT
0
Entering edit mode
@james-w-macdonald-5106
Last seen 22 hours ago
United States
Hi Aaron, Skewes,Aaron wrote: > Hi, > > I am attempting to make a CDF package for Affy GenomeWideSNP 6.0 platform using makecdfenv, and it crashes. Any suggestions? Yes. Don't do that ;-D You want to use oligo for the analysis of the SNP6.0 data. This package doesn't use a cdf package - instead it uses a pdInfoPackage, which you can get via biocLite("pd.genomewidesnp.6"). Best, Jim > > Thanks, > Aaron > >> library("makecdfenv") > Loading required package: Biobase > Loading required package: tools > > Welcome to Bioconductor > > Vignettes contain introductory material. To view, type > 'openVignette()'. To cite Bioconductor, see > 'citation("Biobase")' and for packages 'citation(pkgname)'. > > Loading required package: affy > Loading required package: affyio > Loading required package: preprocessCore >> make.cdf.package("GenomeWideSNP_6.Full.cdf", species = "Human") > *** glibc detected *** /usr/local/lib64/R/bin/exec/R: malloc(): memory corruption: 0x0000000001149120 *** > ======= Backtrace: ========= > /lib64/libc.so.6[0x36c0a71cd1] > /lib64/libc.so.6(__libc_malloc+0x7d)[0x36c0a72e8d] > /usr/local/lib64/R/bin/exec/R(Rf_allocVector+0x5de)[0x41a26e] > /usr/local/lib64/R/bin/exec/R(Rf_allocMatrix+0x6e)[0x4cc47e] > /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/affyio/libs/affyio.so(ReadCDFFile+0x1cb)[0x2b9550e4cb8b] > /usr/local/lib64/R/bin/exec/R[0x51a286] > /usr/local/lib64/R/bin/exec/R(Rf_eval+0x5b1)[0x5409d1] > /usr/local/lib64/R/bin/exec/R[0x544672] > /usr/local/lib64/R/bin/exec/R(Rf_eval+0x3de)[0x5407fe] > /usr/local/lib64/R/bin/exec/R[0x541430] > /usr/local/lib64/R/bin/exec/R(Rf_eval+0x3de)[0x5407fe] > /usr/local/lib64/R/bin/exec/R(Rf_eval+0x3de)[0x5407fe] > /usr/local/lib64/R/bin/exec/R[0x541430] > /usr/local/lib64/R/bin/exec/R(Rf_eval+0x3de)[0x5407fe] > /usr/local/lib64/R/bin/exec/R(Rf_applyClosure+0x270)[0x542990] > /usr/local/lib64/R/bin/exec/R(Rf_eval+0x2c9)[0x5406e9] > /usr/local/lib64/R/bin/exec/R[0x544672] > /usr/local/lib64/R/bin/exec/R(Rf_eval+0x3de)[0x5407fe] > /usr/local/lib64/R/bin/exec/R[0x541430] > /usr/local/lib64/R/bin/exec/R(Rf_eval+0x3de)[0x5407fe] > /usr/local/lib64/R/bin/exec/R(Rf_applyClosure+0x270)[0x542990] > /usr/local/lib64/R/bin/exec/R(Rf_eval+0x2c9)[0x5406e9] > /usr/local/lib64/R/bin/exec/R(Rf_ReplIteration+0x16e)[0x4144ce] > /usr/local/lib64/R/bin/exec/R(tan+0x30f0)[0x4147c8] > /usr/local/lib64/R/bin/exec/R(run_Rmainloop+0x40)[0x414a90] > /usr/local/lib64/R/bin/exec/R(main+0x18)[0x412578] > /lib64/libc.so.6(__libc_start_main+0xf4)[0x36c0a1d8b4] > /usr/local/lib64/R/bin/exec/R(sinh+0x61)[0x412479] > ======= Memory map: ======== > 00400000-0065c000 r-xp 00000000 68:02 9428372 /usr/local/lib64/R/bin/exec/R > 0085c000-0086b000 rw-p 0025c000 68:02 9428372 /usr/local/lib64/R/bin/exec/R > 0086b000-00902000 rw-p 0086b000 00:00 0 > 00eaa000-267cf000 rw-p 00eaa000 00:00 0 > 36a4000000-36a4035000 r-xp 00000000 68:02 6580119 /usr/lib64/libreadline.so.5.1 > 36a4035000-36a4234000 ---p 00035000 68:02 6580119 /usr/lib64/libreadline.so.5.1 > 36a4234000-36a423c000 rw-p 00034000 68:02 6580119 /usr/lib64/libreadline.so.5.1 > 36a423c000-36a423d000 rw-p 36a423c000 00:00 0 > 36a8000000-36a804f000 r-xp 00000000 68:02 6580023 /usr/lib64/libncurses.so.5.5 > 36a804f000-36a824e000 ---p 0004f000 68:02 6580023 /usr/lib64/libncurses.so.5.5 > 36a824e000-36a825c000 rw-p 0004e000 68:02 6580023 /usr/lib64/libncurses.so.5.5 > 36a825c000-36a825d000 rw-p 36a825c000 00:00 0 > 36c0600000-36c061a000 r-xp 00000000 68:02 1735295 /lib64/ld-2.5.so > 36c081a000-36c081b000 r--p 0001a000 68:02 1735295 /lib64/ld-2.5.so > 36c081b000-36c081c000 rw-p 0001b000 68:02 1735295 /lib64/ld-2.5.so > 36c0a00000-36c0b4a000 r-xp 00000000 68:02 1735296 /lib64/libc-2.5.so > 36c0b4a000-36c0d49000 ---p 0014a000 68:02 1735296 /lib64/libc-2.5.so > 36c0d49000-36c0d4d000 r--p 00149000 68:02 1735296 /lib64/libc-2.5.so > 36c0d4d000-36c0d4e000 rw-p 0014d000 68:02 1735296 /lib64/libc-2.5.so > 36c0d4e000-36c0d53000 rw-p 36c0d4e000 00:00 0 > 36c0e00000-36c0e02000 r-xp 00000000 68:02 1735298 /lib64/libdl-2.5.so > 36c0e02000-36c1002000 ---p 00002000 68:02 1735298 /lib64/libdl-2.5.so > 36c1002000-36c1003000 r--p 00002000 68:02 1735298 /lib64/libdl-2.5.so > 36c1003000-36c1004000 rw-p 00003000 68:02 1735298 /lib64/libdl-2.5.so > 36c1200000-36c1282000 r-xp 00000000 68:02 1735306 /lib64/libm-2.5.so > 36c1282000-36c1481000 ---p 00082000 68:02 1735306 /lib64/libm-2.5.so > 36c1481000-36c1482000 r--p 00081000 68:02 1735306 /lib64/libm-2.5.so > 36c1482000-36c1483000 rw-p 00082000 68:02 1735306 /lib64/libm-2.5.so > 36c1600000-36c1615000 r-xp 00000000 68:02 1735297 /lib64/libpthread-2.5.so > 36c1615000-36c1814000 ---p 00015000 68:02 1735297 /lib64/libpthread-2.5.so > 36c1814000-36c1815000 r--p 00014000 68:02 1735297 /lib64/libpthread-2.5.so > 36c1815000-36c1816000 rw-p 00015000 68:02 1735297 /lib64/libpthread-2.5.so > 36c1816000-36c181a000 rw-p 36c1816000 00:00 0 > 36c1a00000-36c1a14000 r-xp 00000000 68:02 7405522 /usr/lib64/libz.so.1.2.3 > 36c1a14000-36c1c13000 ---p 00014000 68:02 7405522 /usr/lib64/libz.so.1.2.3 > 36c1c13000-36c1c14000 rw-p 00013000 68:02 7405522 /usr/lib64/libz.so.1.2.3 > 36c5e00000-36c5e0d000 r-xp 00000000 68:02 1735307 /lib64/libgcc_s-4.1.2-20080102.so.1 > 36c5e0d000-36c600d000 ---p 0000d000 68:02 1735307 /lib64/libgcc_s-4.1.2-20080102.so.1 > 36c600d000-36c600e000 rw-p 0000d000 68:02 1735307 /lib64/libgcc_s-4.1.2-20080102.so.1 > 2b954c2f8000-2b954c2fa000 rw-p 2b954c2f8000 00:00 0 > 2b954c2fa000-2b954c326000 r-xp 00000000 68:02 9428369 /usr/local/lib64/R/lib/libRblas.so > 2b954c326000-2b954c525000 ---p 0002c000 68:02 9428369 /usr/local/lib64/R/lib/libRblas.so > 2b954c525000-2b954c526000 rw-p 0002b000 68:02 9428369 /usr/local/lib64/R/lib/libRblas.so > 2b954c54b000-2b954c5e1000 r-xp 00000000 68:02 7422570 /usr/lib64/libgfortran.so.1.0.0 > 2b954c5e1000-2b954c7e0000 ---p 00096000 68:02 7422570 /usr/lib64/libgfortran.so.1.0.0 > 2b954c7e0000-2b954c7e2000 rw-p 00095000 68:02 7422570 /usr/lib64/libgfortran.so.1.0.0 > 2b954c7e2000-2b954c7e5000 rw-p 2b954c7e2000 00:00 0 > 2b954c7e5000-2b954fdb7000 r--p 00000000 68:02 7404270 /usr/lib/locale/locale-archive > 2b954fdb7000-2b954fe9c000 rw-p 2b954fdb7000 00:00 0 > 2b954fe9e000-2b954fee2000 rw-p 2b954fe9e000 00:00 0 > 2b954fee2000-2b954fee9000 r--s 00000000 68:02 7404775 /usr/lib64/gconv/gconv-modules.cache > 2b954ff0e000-2b954ff18000 r-xp 00000000 68:02 1735036 /lib64/libnss_files-2.5.so > 2b954ff18000-2b9550117000 ---p 0000a000 68:02 1735036 /lib64/libnss_files-2.5.so > 2b9550117000-2b9550118000 r--p 00009000 68:02 1735036 /lib64/libnss_files-2.5.so > 2b9550118000-2b9550119000 rw-p 0000a000 68:02 1735036 /lib64/libnss_files-2.5.so > 2b9550119000-2b9550143000 rw-p 2b9550119000 00:00 0 > 2b9550143000-2b9550149000 r-xp 00000000 68:02 9430370 /usr/local/lib64/R/library/methods/libs/methods.so > 2b9550149000-2b9550348000 ---p 00006000 68:02 9430370 /usr/local/lib64/R/library/methods/libs/methods.so > 2b9550348000-2b9550349000 rw-p 00005000 68:02 9430370 /usr/local/lib64/R/library/methods/libs/methods.so > 2b955034a000-2b95503aa000 rw-p 2b955034a000 00:00 0 > 2b95503aa000-2b95503ab000 r--p 00000000 68:02 9463067 /usr/local/lib64/R/share/locale/en/LC_MESSAGES/R.mo > 2b95503ab000-2b95503ac000 r-xp 00000000 68:02 7404712 /usr/lib64/gconv/ISO8859-1.so > 2b95503ac000-2b95505ac000 ---p 00001000 68:02 7404712 /usr/lib64/gconv/ISO8859-1.so > 2b95505ac000-2b95505ae000 rw-p 00001000 68:02 7404712 /usr/lib64/gconv/ISO8859-1.so > 2b95505ae000-2b95505ca000 r-xp 00000000 68:02 9433566 /usr/local/lib64/R/library/grDevices/libs/grDevices.so > 2b95505ca000-2b95507ca000 ---p 0001c000 68:02 9433566 /usr/local/lib64/R/library/grDevices/libs/grDevices.so > 2b95507ca000-2b95507cb000 rw-p 0001c000 68:02 9433566 /usr/local/lib64/R/library/grDevices/libs/grDevices.so > 2b95507cb000-2b955082c000 r-xp 00000000 68:02 9460776 /usr/local/lib64/R/library/stats/libs/stats.so > 2b955082c000-2b9550a2b000 ---p 00061000 68:02 9460776 /usr/local/lib64/R/library/stats/libs/stats.so > 2b9550a2b000-2b9550a2e000 rw-p 00060000 68:02 9460776 /usr/local/lib64/R/library/stats/libs/stats.so > 2b9550a2e000-2b9550a31000 r-xp 00000000 68:02 9432206 /usr/local/lib64/R/library/tools/libs/tools.so > 2b9550a31000-2b9550c30000 ---p 00003000 68:02 9432206 /usr/local/lib64/R/library/tools/libs/tools.so > 2b9550c30000-2b9550c31000 rw-p 00002000 68:02 9432206 /usr/local/lib64/R/library/tools/libs/tools.so > 2b9550c31000-2b9550c36000 r-xp 00000000 68:05 5538407 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/Biobase/libs/Biobase.so > 2b9550c36000-2b9550e35000 ---p 00005000 68:05 5538407 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/Biobase/libs/Biobase.so > 2b9550e35000-2b9550e36000 rw-p 00004000 68:05 5538407 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/Biobase/libs/Biobase.so > 2b9550e36000-2b9550e5d000 r-xp 00000000 68:05 5539021 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/affyio/libs/affyio.so > 2b9550e5d000-2b955105c000 ---p 00027000 68:05 5539021 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/affyio/libs/affyio.so > 2b955105c000-2b955105d000 rw-p 00026000 68:05 5539021 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/affyio/libs/affyio.so > 2b955105d000-2b955107d000 r-xp 00000000 68:05 5538942 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/preprocessCore/libs/preprocessCore.so > 2b955107d000-2b955127d000 ---p 00020000 68:05 5538942 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/preprocessCore/libs/preprocessCore.so > 2b955127d000-2b955127e000 rw-p 00020000 68:05 5538942 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/preprocessCore/libs/preprocessCore.so > 2b955127e000-2b95513e4000 r-xp 00000000 68:02 9428377 /usr/local/lib64/R/lib/libRlapack.so > 2b95513e4000-2b95515e3000 ---p 00166000 68:02 9428377 /usr/local/lib64/R/lib/libRlapack.so > 2b95515e3000-2b95515e5000 rw-p 00165000 68:02 9428377 /usr/local/lib64/R/lib/libRlapack.so > 2b95515e5000-2b9551660000 rw-p 2b95515e5000 00:00 0 > 2b9551660000-2b9551668000 r-xp 00000000 68:05 5539060 /home/askewes/R/x86_64-unknown-linux-gnu-library/2.7/affy/libs/affy.so > 2b9551668000-2b9551868000 ---p 00008000 68:05 5539060 /home/askewes/R/x86_64-unknown-linux-gnu-library/2.7/affy/libs/affy.so > 2b9551868000-2b9551869000 rw-p 00008000 68:05 5539060 /home/askewes/R/x86_64-unknown-linux-gnu-library/2.7/affy/libs/affy.so > 2b9551869000-2b955186c000 r-xp 00000000 68:05 5570789 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/makecdfenv/libs/makecdfenv.so > 2b955186c000-2b9551a6b000 ---p 00003000 68:05 5570789 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/makecdfenv/libs/makecdfenv.so > 2b9551a6b000-2b9551a6c000 rw-p 00002000 68:05 5570789 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/makecdfenv/libs/makecdfenv.so > 2b9551a6c000-2b9551a6d000 rw-p 2b9551a6c000 00:00 0 > 2b9551a6e000-2b9558618000 rw-p 2b9551a6e000 00:00 0 > 2b955c000000-2b955c021000 rw-p 2b955c000000 00:00 0 > 2b955c021000-2b9560000000 ---p 2b955c021000 00:00 0 > 7fff5e795000-7fff5e7b2000 rw-p 7fff5e795000 00:00 0 [stack] > ffffffffff600000-ffffffffffe00000 ---p 00000000 00:00 0 [vdso] > Aborted > > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor -- James W. MacDonald, M.S. Biostatistician Hildebrandt Lab 8220D MSRB III 1150 W. Medical Center Drive Ann Arbor MI 48109-0646 734-936-8662
ADD COMMENT
0
Entering edit mode
Either that or have a look at aroma.affymetrix. Regards, Benjamin -----Urspr?ngliche Nachricht----- Von: bioconductor-bounces at stat.math.ethz.ch [mailto:bioconductor-bounces at stat.math.ethz.ch] Im Auftrag von James W. MacDonald Gesendet: 02 December 2008 22:31 An: Skewes,Aaron Cc: bioconductor at stat.math.ethz.ch Betreff: Re: [BioC] makecdfenv crashes Hi Aaron, Skewes,Aaron wrote: > Hi, > > I am attempting to make a CDF package for Affy GenomeWideSNP 6.0 platform using makecdfenv, and it crashes. Any suggestions? Yes. Don't do that ;-D You want to use oligo for the analysis of the SNP6.0 data. This package doesn't use a cdf package - instead it uses a pdInfoPackage, which you can get via biocLite("pd.genomewidesnp.6"). Best, Jim > > Thanks, > Aaron > >> library("makecdfenv") > Loading required package: Biobase > Loading required package: tools > > Welcome to Bioconductor > > Vignettes contain introductory material. To view, type > 'openVignette()'. To cite Bioconductor, see > 'citation("Biobase")' and for packages 'citation(pkgname)'. > > Loading required package: affy > Loading required package: affyio > Loading required package: preprocessCore >> make.cdf.package("GenomeWideSNP_6.Full.cdf", species = "Human") > *** glibc detected *** /usr/local/lib64/R/bin/exec/R: malloc(): memory corruption: 0x0000000001149120 *** > ======= Backtrace: ========= > /lib64/libc.so.6[0x36c0a71cd1] > /lib64/libc.so.6(__libc_malloc+0x7d)[0x36c0a72e8d] > /usr/local/lib64/R/bin/exec/R(Rf_allocVector+0x5de)[0x41a26e] > /usr/local/lib64/R/bin/exec/R(Rf_allocMatrix+0x6e)[0x4cc47e] > /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/affyio/libs/affyio.so(R eadCDFFile+0x1cb)[0x2b9550e4cb8b] > /usr/local/lib64/R/bin/exec/R[0x51a286] > /usr/local/lib64/R/bin/exec/R(Rf_eval+0x5b1)[0x5409d1] > /usr/local/lib64/R/bin/exec/R[0x544672] > /usr/local/lib64/R/bin/exec/R(Rf_eval+0x3de)[0x5407fe] > /usr/local/lib64/R/bin/exec/R[0x541430] > /usr/local/lib64/R/bin/exec/R(Rf_eval+0x3de)[0x5407fe] > /usr/local/lib64/R/bin/exec/R(Rf_eval+0x3de)[0x5407fe] > /usr/local/lib64/R/bin/exec/R[0x541430] > /usr/local/lib64/R/bin/exec/R(Rf_eval+0x3de)[0x5407fe] > /usr/local/lib64/R/bin/exec/R(Rf_applyClosure+0x270)[0x542990] > /usr/local/lib64/R/bin/exec/R(Rf_eval+0x2c9)[0x5406e9] > /usr/local/lib64/R/bin/exec/R[0x544672] > /usr/local/lib64/R/bin/exec/R(Rf_eval+0x3de)[0x5407fe] > /usr/local/lib64/R/bin/exec/R[0x541430] > /usr/local/lib64/R/bin/exec/R(Rf_eval+0x3de)[0x5407fe] > /usr/local/lib64/R/bin/exec/R(Rf_applyClosure+0x270)[0x542990] > /usr/local/lib64/R/bin/exec/R(Rf_eval+0x2c9)[0x5406e9] > /usr/local/lib64/R/bin/exec/R(Rf_ReplIteration+0x16e)[0x4144ce] > /usr/local/lib64/R/bin/exec/R(tan+0x30f0)[0x4147c8] > /usr/local/lib64/R/bin/exec/R(run_Rmainloop+0x40)[0x414a90] > /usr/local/lib64/R/bin/exec/R(main+0x18)[0x412578] > /lib64/libc.so.6(__libc_start_main+0xf4)[0x36c0a1d8b4] > /usr/local/lib64/R/bin/exec/R(sinh+0x61)[0x412479] > ======= Memory map: ======== > 00400000-0065c000 r-xp 00000000 68:02 9428372 /usr/local/lib64/R/bin/exec/R > 0085c000-0086b000 rw-p 0025c000 68:02 9428372 /usr/local/lib64/R/bin/exec/R > 0086b000-00902000 rw-p 0086b000 00:00 0 > 00eaa000-267cf000 rw-p 00eaa000 00:00 0 > 36a4000000-36a4035000 r-xp 00000000 68:02 6580119 /usr/lib64/libreadline.so.5.1 > 36a4035000-36a4234000 ---p 00035000 68:02 6580119 /usr/lib64/libreadline.so.5.1 > 36a4234000-36a423c000 rw-p 00034000 68:02 6580119 /usr/lib64/libreadline.so.5.1 > 36a423c000-36a423d000 rw-p 36a423c000 00:00 0 > 36a8000000-36a804f000 r-xp 00000000 68:02 6580023 /usr/lib64/libncurses.so.5.5 > 36a804f000-36a824e000 ---p 0004f000 68:02 6580023 /usr/lib64/libncurses.so.5.5 > 36a824e000-36a825c000 rw-p 0004e000 68:02 6580023 /usr/lib64/libncurses.so.5.5 > 36a825c000-36a825d000 rw-p 36a825c000 00:00 0 > 36c0600000-36c061a000 r-xp 00000000 68:02 1735295 /lib64/ld-2.5.so > 36c081a000-36c081b000 r--p 0001a000 68:02 1735295 /lib64/ld-2.5.so > 36c081b000-36c081c000 rw-p 0001b000 68:02 1735295 /lib64/ld-2.5.so > 36c0a00000-36c0b4a000 r-xp 00000000 68:02 1735296 /lib64/libc-2.5.so > 36c0b4a000-36c0d49000 ---p 0014a000 68:02 1735296 /lib64/libc-2.5.so > 36c0d49000-36c0d4d000 r--p 00149000 68:02 1735296 /lib64/libc-2.5.so > 36c0d4d000-36c0d4e000 rw-p 0014d000 68:02 1735296 /lib64/libc-2.5.so > 36c0d4e000-36c0d53000 rw-p 36c0d4e000 00:00 0 > 36c0e00000-36c0e02000 r-xp 00000000 68:02 1735298 /lib64/libdl-2.5.so > 36c0e02000-36c1002000 ---p 00002000 68:02 1735298 /lib64/libdl-2.5.so > 36c1002000-36c1003000 r--p 00002000 68:02 1735298 /lib64/libdl-2.5.so > 36c1003000-36c1004000 rw-p 00003000 68:02 1735298 /lib64/libdl-2.5.so > 36c1200000-36c1282000 r-xp 00000000 68:02 1735306 /lib64/libm-2.5.so > 36c1282000-36c1481000 ---p 00082000 68:02 1735306 /lib64/libm-2.5.so > 36c1481000-36c1482000 r--p 00081000 68:02 1735306 /lib64/libm-2.5.so > 36c1482000-36c1483000 rw-p 00082000 68:02 1735306 /lib64/libm-2.5.so > 36c1600000-36c1615000 r-xp 00000000 68:02 1735297 /lib64/libpthread-2.5.so > 36c1615000-36c1814000 ---p 00015000 68:02 1735297 /lib64/libpthread-2.5.so > 36c1814000-36c1815000 r--p 00014000 68:02 1735297 /lib64/libpthread-2.5.so > 36c1815000-36c1816000 rw-p 00015000 68:02 1735297 /lib64/libpthread-2.5.so > 36c1816000-36c181a000 rw-p 36c1816000 00:00 0 > 36c1a00000-36c1a14000 r-xp 00000000 68:02 7405522 /usr/lib64/libz.so.1.2.3 > 36c1a14000-36c1c13000 ---p 00014000 68:02 7405522 /usr/lib64/libz.so.1.2.3 > 36c1c13000-36c1c14000 rw-p 00013000 68:02 7405522 /usr/lib64/libz.so.1.2.3 > 36c5e00000-36c5e0d000 r-xp 00000000 68:02 1735307 /lib64/libgcc_s-4.1.2-20080102.so.1 > 36c5e0d000-36c600d000 ---p 0000d000 68:02 1735307 /lib64/libgcc_s-4.1.2-20080102.so.1 > 36c600d000-36c600e000 rw-p 0000d000 68:02 1735307 /lib64/libgcc_s-4.1.2-20080102.so.1 > 2b954c2f8000-2b954c2fa000 rw-p 2b954c2f8000 00:00 0 > 2b954c2fa000-2b954c326000 r-xp 00000000 68:02 9428369 /usr/local/lib64/R/lib/libRblas.so > 2b954c326000-2b954c525000 ---p 0002c000 68:02 9428369 /usr/local/lib64/R/lib/libRblas.so > 2b954c525000-2b954c526000 rw-p 0002b000 68:02 9428369 /usr/local/lib64/R/lib/libRblas.so > 2b954c54b000-2b954c5e1000 r-xp 00000000 68:02 7422570 /usr/lib64/libgfortran.so.1.0.0 > 2b954c5e1000-2b954c7e0000 ---p 00096000 68:02 7422570 /usr/lib64/libgfortran.so.1.0.0 > 2b954c7e0000-2b954c7e2000 rw-p 00095000 68:02 7422570 /usr/lib64/libgfortran.so.1.0.0 > 2b954c7e2000-2b954c7e5000 rw-p 2b954c7e2000 00:00 0 > 2b954c7e5000-2b954fdb7000 r--p 00000000 68:02 7404270 /usr/lib/locale/locale-archive > 2b954fdb7000-2b954fe9c000 rw-p 2b954fdb7000 00:00 0 > 2b954fe9e000-2b954fee2000 rw-p 2b954fe9e000 00:00 0 > 2b954fee2000-2b954fee9000 r--s 00000000 68:02 7404775 /usr/lib64/gconv/gconv-modules.cache > 2b954ff0e000-2b954ff18000 r-xp 00000000 68:02 1735036 /lib64/libnss_files-2.5.so > 2b954ff18000-2b9550117000 ---p 0000a000 68:02 1735036 /lib64/libnss_files-2.5.so > 2b9550117000-2b9550118000 r--p 00009000 68:02 1735036 /lib64/libnss_files-2.5.so > 2b9550118000-2b9550119000 rw-p 0000a000 68:02 1735036 /lib64/libnss_files-2.5.so > 2b9550119000-2b9550143000 rw-p 2b9550119000 00:00 0 > 2b9550143000-2b9550149000 r-xp 00000000 68:02 9430370 /usr/local/lib64/R/library/methods/libs/methods.so > 2b9550149000-2b9550348000 ---p 00006000 68:02 9430370 /usr/local/lib64/R/library/methods/libs/methods.so > 2b9550348000-2b9550349000 rw-p 00005000 68:02 9430370 /usr/local/lib64/R/library/methods/libs/methods.so > 2b955034a000-2b95503aa000 rw-p 2b955034a000 00:00 0 > 2b95503aa000-2b95503ab000 r--p 00000000 68:02 9463067 /usr/local/lib64/R/share/locale/en/LC_MESSAGES/R.mo > 2b95503ab000-2b95503ac000 r-xp 00000000 68:02 7404712 /usr/lib64/gconv/ISO8859-1.so > 2b95503ac000-2b95505ac000 ---p 00001000 68:02 7404712 /usr/lib64/gconv/ISO8859-1.so > 2b95505ac000-2b95505ae000 rw-p 00001000 68:02 7404712 /usr/lib64/gconv/ISO8859-1.so > 2b95505ae000-2b95505ca000 r-xp 00000000 68:02 9433566 /usr/local/lib64/R/library/grDevices/libs/grDevices.so > 2b95505ca000-2b95507ca000 ---p 0001c000 68:02 9433566 /usr/local/lib64/R/library/grDevices/libs/grDevices.so > 2b95507ca000-2b95507cb000 rw-p 0001c000 68:02 9433566 /usr/local/lib64/R/library/grDevices/libs/grDevices.so > 2b95507cb000-2b955082c000 r-xp 00000000 68:02 9460776 /usr/local/lib64/R/library/stats/libs/stats.so > 2b955082c000-2b9550a2b000 ---p 00061000 68:02 9460776 /usr/local/lib64/R/library/stats/libs/stats.so > 2b9550a2b000-2b9550a2e000 rw-p 00060000 68:02 9460776 /usr/local/lib64/R/library/stats/libs/stats.so > 2b9550a2e000-2b9550a31000 r-xp 00000000 68:02 9432206 /usr/local/lib64/R/library/tools/libs/tools.so > 2b9550a31000-2b9550c30000 ---p 00003000 68:02 9432206 /usr/local/lib64/R/library/tools/libs/tools.so > 2b9550c30000-2b9550c31000 rw-p 00002000 68:02 9432206 /usr/local/lib64/R/library/tools/libs/tools.so > 2b9550c31000-2b9550c36000 r-xp 00000000 68:05 5538407 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/Biobase/libs/Biobase.so > 2b9550c36000-2b9550e35000 ---p 00005000 68:05 5538407 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/Biobase/libs/Biobase.so > 2b9550e35000-2b9550e36000 rw-p 00004000 68:05 5538407 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/Biobase/libs/Biobase.so > 2b9550e36000-2b9550e5d000 r-xp 00000000 68:05 5539021 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/affyio/libs/affyio.so > 2b9550e5d000-2b955105c000 ---p 00027000 68:05 5539021 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/affyio/libs/affyio.so > 2b955105c000-2b955105d000 rw-p 00026000 68:05 5539021 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/affyio/libs/affyio.so > 2b955105d000-2b955107d000 r-xp 00000000 68:05 5538942 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/preprocessCore/libs/pre processCore.so > 2b955107d000-2b955127d000 ---p 00020000 68:05 5538942 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/preprocessCore/libs/pre processCore.so > 2b955127d000-2b955127e000 rw-p 00020000 68:05 5538942 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/preprocessCore/libs/pre processCore.so > 2b955127e000-2b95513e4000 r-xp 00000000 68:02 9428377 /usr/local/lib64/R/lib/libRlapack.so > 2b95513e4000-2b95515e3000 ---p 00166000 68:02 9428377 /usr/local/lib64/R/lib/libRlapack.so > 2b95515e3000-2b95515e5000 rw-p 00165000 68:02 9428377 /usr/local/lib64/R/lib/libRlapack.so > 2b95515e5000-2b9551660000 rw-p 2b95515e5000 00:00 0 > 2b9551660000-2b9551668000 r-xp 00000000 68:05 5539060 /home/askewes/R/x86_64-unknown-linux-gnu-library/2.7/affy/libs/affy.so > 2b9551668000-2b9551868000 ---p 00008000 68:05 5539060 /home/askewes/R/x86_64-unknown-linux-gnu-library/2.7/affy/libs/affy.so > 2b9551868000-2b9551869000 rw-p 00008000 68:05 5539060 /home/askewes/R/x86_64-unknown-linux-gnu-library/2.7/affy/libs/affy.so > 2b9551869000-2b955186c000 r-xp 00000000 68:05 5570789 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/makecdfenv/libs/makecdf env.so > 2b955186c000-2b9551a6b000 ---p 00003000 68:05 5570789 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/makecdfenv/libs/makecdf env.so > 2b9551a6b000-2b9551a6c000 rw-p 00002000 68:05 5570789 /home/askewes/R/x86_64-unknown-linux-gnu- library/2.7/makecdfenv/libs/makecdf env.so > 2b9551a6c000-2b9551a6d000 rw-p 2b9551a6c000 00:00 0 > 2b9551a6e000-2b9558618000 rw-p 2b9551a6e000 00:00 0 > 2b955c000000-2b955c021000 rw-p 2b955c000000 00:00 0 > 2b955c021000-2b9560000000 ---p 2b955c021000 00:00 0 > 7fff5e795000-7fff5e7b2000 rw-p 7fff5e795000 00:00 0 [stack] > ffffffffff600000-ffffffffffe00000 ---p 00000000 00:00 0 [vdso] > Aborted > > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor -- James W. MacDonald, M.S. Biostatistician Hildebrandt Lab 8220D MSRB III 1150 W. Medical Center Drive Ann Arbor MI 48109-0646 734-936-8662 _______________________________________________ Bioconductor mailing list Bioconductor at stat.math.ethz.ch https://stat.ethz.ch/mailman/listinfo/bioconductor Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor -- Pflichtangaben gem?? Gesetz ?ber elektronische Handelsregister und Genossenschaftsregister sowie das Unternehmensregister (EHUG): Universit?tsklinikum Hamburg-Eppendorf K?rperschaft des ?ffentlichen Rechts Gerichtsstand: Hamburg Vorstandsmitglieder: Prof. Dr. J?rg F. Debatin (Vorsitzender) Dr. Alexander Kirstein Ricarda Klein Prof. Dr. Dr. Uwe Koch-Gromus
ADD REPLY

Login before adding your answer.

Traffic: 613 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6