GoStats - getting genes from categories
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@adrian-johnson-2728
Last seen 4.0 years ago
dear group, is it possible to get list of genes contributing to enrichment of a category in GoStats. for example: apoptosis is enriched as a GO category. now I want to get list of genes responsible for that category. is it possible in gostats. thanks Ad.
GO GOstats Category GO GOstats Category • 1.2k views
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@james-w-macdonald-5106
Last seen 13 hours ago
United States
Hi Adrian, Adrian Johnson wrote: > dear group, > is it possible to get list of genes contributing to enrichment of a > category in GoStats. > for example: > apoptosis is enriched as a GO category. now I want to get list of > genes responsible for that category. is it possible in gostats. Yes. See ?probeSetSummary. Best, Jim > thanks > Ad. > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor -- James W. MacDonald, M.S. Biostatistician Douglas Lab University of Michigan Department of Human Genetics 5912 Buhl 1241 E. Catherine St. Ann Arbor MI 48109-5618 734-615-7826
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