Problems with EBImage installation
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@perry_d_haalandbdcom-3416
Last seen 7.7 years ago
I am trying to install EBImage on a Windows box. I have R version 2.8.1. I downloaded the newest release of ImageMagick to c:\imagemagick and it is in my path. GTK+ is in the path c:\gtk. Both of these are listed correctly in my path. I downloaded EBImage_2.6.0.zip I get the following error message: > library(EBImage) >>>> in dialog box <<< Runtime Error! Program: C:\R\R-2.8.1\bin\Rgui.exe R6034 An application has made an attempt to load the C runtime library incorrectly. Please contact the application's support team for more information. Perry Haaland, Ph.D. BD Fellow, Bioinformatics BD Technologies (919)-349-2172 perry_haaland at bd.com _________________________________________________________________ ******************************************************************* IMPORTANT MESSAGE FOR RECIPIENTS IN THE U.S.A.: This message may constitute an advertisement of a BD group's products or services or a solicitation of interest in them. If this is such a message and you would like to opt out of receiving future advertisements or solicitations from this BD group, please forward this e-mail to optoutbygroup at bd.com. ******************************************************************* This message (which includes any attachments) is intended only for the designated recipient(s). It may contain confidential or proprietary information and may be subject to the attorney-client privilege or other confidentiality protections. If you are not a designated recipient, you may not review, use, copy or distribute this message. If you received this in error, please notify the sender by reply e-mail and delete this message. Thank you. ******************************************************************* Corporate Headquarters Mailing Address: BD (Becton, Dickinson and Company) 1 Becton Drive Franklin Lakes, NJ 07417 U.S.A. *******************************************************************
EBImage EBImage • 668 views
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Gregoire Pau ▴ 310
@gregoire-pau-3274
Last seen 7.7 years ago
Hi Perry, First, I would suggest you to switch to the latest Bioconductor release 2.4, which contains EBImage 3.0.0 (also available at http://bioconductor.org/packages/2.4/bioc/html/EBImage.html). EBImage 3.0.0 is a major release which fixes a lot of speed/bug/design issues. R6034 seems to be a linking related error (C runtime library loaded without manifest). Could you please tell me what are your versions of GTK+ and ImageMagick ? It may be related to the new ImageMagick 6.5.1 which uses a different signature for some deprecated functions. This issue is fixed in EBImage 3.0.0. EBImage works fine on Windows with gtk+-2.0 2.12.9 and ImageMagick 6.3.7 Q16 and 6.4.2 Q16. Hope this will help ! Best regards, Greg --- Gregoire Pau EMBL Research officer http://www.ebi.ac.uk/~gpau/ Perry_D_Haaland at bd.com wrote: > I am trying to install EBImage on a Windows box. I have R version 2.8.1. I > downloaded the newest release of ImageMagick to c:\imagemagick and it is in > my path. GTK+ is in the path c:\gtk. Both of these are listed correctly in > my path. I downloaded EBImage_2.6.0.zip > I get the following error message: > > library(EBImage) > >>>> in dialog box <<< > Runtime Error! > Program: C:\R\R-2.8.1\bin\Rgui.exe > R6034 > An application has made an attempt to load the C runtime library > incorrectly. Please contact the application's support team for more > information. > Perry Haaland, Ph.D. > BD Fellow, Bioinformatics > BD Technologies > (919)-349-2172 > perry_haaland at bd.com > _________________________________________________________________ > > ******************************************************************* > IMPORTANT MESSAGE FOR RECIPIENTS IN THE U.S.A.: This message may constitute > an advertisement of a BD group's products or services or a solicitation of > interest in them. If this is such a message and you would like to opt out of > receiving future advertisements or solicitations from this BD group, please > forward this e-mail to optoutbygroup at bd.com. > ***************************************************************** **This > message (which includes any attachments) is intended only for the designated > recipient(s). It may contain confidential or proprietary information and may > be subject to the attorney-client privilege or other confidentiality > protections. If you are not a designated recipient, you may not review, use, > copy or distribute this message. If you received this in error, please > notify the sender by reply e-mail and delete this message. Thank you. > ******************************************************************* > Corporate Headquarters Mailing Address: BD (Becton, Dickinson and Company) 1 > Becton Drive Franklin Lakes, NJ 07417 U.S.A. > ******************************************************************* > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor
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Gregoire Pau ▴ 310
@gregoire-pau-3274
Last seen 7.7 years ago
Dear Perry, According to a forum, this issue is related to ImageMagick which is now built with Visual C++ 2008 and requires external VC++ 2008 components to be run (!!). The Microsoft Visual C++ 2008 Redistributable Package can be downloaded here: http://www.microsoft.com/downloads/details.aspx?FamilyID=9b2da534-3e03 -4391-8a4d-074b9f2bc1bf&displaylang=en Just install it and EBImage will work fine. It is a bit unfortunate that one should download compiler-specific components to use a redistributable library !! This is not the first time that ImageMagick brings a lot of troubles... Hope this helps. Best regards, Greg --- Gregoire Pau EMBL Research Officer http://www.ebi.ac.uk/~gpau/ Perry_D_Haaland at bd.com wrote: > I am trying to install EBImage on a Windows box. I have R version 2.8.1. I > downloaded the newest release of ImageMagick to c:\imagemagick and it is in > my path. GTK+ is in the path c:\gtk. Both of these are listed correctly in > my path. I downloaded EBImage_2.6.0.zip > I get the following error message: > > library(EBImage) > >>>> in dialog box <<< > Runtime Error! > Program: C:\R\R-2.8.1\bin\Rgui.exe > R6034 > An application has made an attempt to load the C runtime library > incorrectly. Please contact the application's support team for more > information. > Perry Haaland, Ph.D. > BD Fellow, Bioinformatics > BD Technologies > (919)-349-2172 > perry_haaland at bd.com > _________________________________________________________________ > > ******************************************************************* > IMPORTANT MESSAGE FOR RECIPIENTS IN THE U.S.A.: This message may constitute > an advertisement of a BD group's products or services or a solicitation of > interest in them. If this is such a message and you would like to opt out of > receiving future advertisements or solicitations from this BD group, please > forward this e-mail to optoutbygroup at bd.com. > ***************************************************************** **This > message (which includes any attachments) is intended only for the designated > recipient(s). It may contain confidential or proprietary information and may > be subject to the attorney-client privilege or other confidentiality > protections. If you are not a designated recipient, you may not review, use, > copy or distribute this message. If you received this in error, please > notify the sender by reply e-mail and delete this message. Thank you. > ******************************************************************* > Corporate Headquarters Mailing Address: BD (Becton, Dickinson and Company) 1 > Becton Drive Franklin Lakes, NJ 07417 U.S.A. > ******************************************************************* > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor
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