Unable to install Rgraphviz
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anupam sinha ▴ 270
@anupam-sinha-3207
Last seen 8.2 years ago
Hi all, I am trying to install *Rgraphviz *on an RHEL5 system. But it keeps on giving the following error: * > source("http://bioconductor.org/biocLite.R") > biocLite("Rgraphviz")* *make: *** [LL_funcs.o] Error 1 ERROR: compilation failed for package ‘Rgraphviz’ ** *I have already installed graphviz-2.24.0*. * *> sessionInfo() R version 2.9.0 (2009-04-17) x86_64-redhat-linux-gnu locale: LC_CTYPE=en_US.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=en_US .UTF-8;LC_MONETARY=C;LC_MESSAGES=en_US.UTF-8;LC_PAPER=en_US.UTF-8;LC_N AME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTI FICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base loaded via a namespace (and not attached): [1] tcltk_2.9.0 tools_2.9.0 *Any help is appreciated. Regards, Anupam Sinha* * [[alternative HTML version deleted]]
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@kasper-daniel-hansen-2979
Last seen 9 weeks ago
United States
Graphvis 2.24 is a new release (very recent). I have however checked that on my machine (OS X Leopard), Rgraphviz and Graphviz 2.24 plays well together. Please give us all of the output from the Rgraphviz installation attempt. Kasper On Jun 27, 2009, at 1:45 , anupam sinha wrote: > Hi all, > I am trying to install *Rgraphviz *on an RHEL5 system. But > it keeps > on giving the following error: > * >> source("http://bioconductor.org/biocLite.R") >> biocLite("Rgraphviz")* > > > *make: *** [LL_funcs.o] Error 1 > ERROR: compilation failed for package ?Rgraphviz? > ** > *I have already installed graphviz-2.24.0*. * > > *> sessionInfo() > R version 2.9.0 (2009-04-17) > x86_64-redhat-linux-gnu > > locale: > LC_CTYPE > = > en_US > .UTF > -8 > ;LC_NUMERIC > = > C > ;LC_TIME > = > en_US > .UTF > -8 > ;LC_COLLATE > = > en_US > .UTF > -8 > ;LC_MONETARY > = > C > ;LC_MESSAGES > = > en_US > .UTF > -8 > ;LC_PAPER > = > en_US > .UTF > -8 > ;LC_NAME > = > C > ;LC_ADDRESS > =C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATION=C > > attached base packages: > [1] stats graphics grDevices utils datasets methods base > > loaded via a namespace (and not attached): > [1] tcltk_2.9.0 tools_2.9.0 > > > *Any help is appreciated. > > Regards, > > Anupam Sinha* > * > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor
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Hi , Attached with this mail is all of the output from my Rgraphviz installation attempt. Thanks in advanceRegards, Anupam Sinha
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