Question: Question about inspecting splices indexes
gravatar for raffaele calogero
9.7 years ago by
Italy/Turin/University of Torino
raffaele calogero500 wrote:
Leoni wrote: >Dear bioconductors >I'm trying to use the OneChannelGUI package to analyze some exon arrays >experiment... >After succesfully normalized, filtered, computed MIDAS and SI index of my >array, now I'm trying to use the function inspecting splicing indexes(on the >midas alternatively spliced probes detected) to obtain gene level and exon >level probeset ids for my alternatively spliced exons (then I'd use them to >identify the Isoform for the alternative splicing event) as in the manual is >mentioned. > Everytime I try to use the inspecting splicing indexes function I retrieve >always the same error: Error in xy coords(x,y,xlabel,ylabel,log) x and Y >lenghts differ. >Someone could give my any suggestion? Is there something wrong in what I do? >Many thanks To reproduce your error and to understand the proble I need that you send me the results of sessionInfo() and that you provide me the list of exon level probe sets you are trying to plot and which organism you are using. Cheers Raffaele -- ---------------------------------------- Prof. Raffaele A. Calogero Bioinformatics and Genomics Unit Dipartimento di Scienze Cliniche e Biologiche c/o Az. Ospedaliera S. Luigi Regione Gonzole 10, Orbassano 10043 Torino tel. ++39 0116705417 Lab. ++39 0116705408 Fax ++39 0119038639 Mobile ++39 3333827080 email: raffaele.calogero at raffaele[dot]calogero[at]gmail[dot]com www: Info:
organism probe onechannelgui • 428 views
ADD COMMENTlink written 9.7 years ago by raffaele calogero500
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