Question: Is color.pathway.by.objects (KEGGSOAP) working?
0
gravatar for John Zhang
9.5 years ago by
John Zhang2.9k
John Zhang2.9k wrote:
Some changes related to KEGG SOAP server were not reflected in old versions of BioC. Try updating your R and BioC to the latest version. >X-Original-To: jzhang at jimmy.harvard.edu >Delivered-To: jzhang at jimmy.harvard.edu >X-IronPort-Anti-Spam-Filtered: true >X-IronPort-Anti-Spam-Result: AigBAOa7QUuBhJEPlGdsb2JhbACZA4JIAQEBAQkLCAkTBbk6hDAE >X-IronPort-AV: E=Sophos;i="4.47,499,1257138000"; d="scan'208";a="299054629" >X-SBRS: 4.8 >X-Spam-Checker-Version: SpamAssassin 3.2.5 (2008-06-10) on hypatia.math.ethz.ch >X-Spam-Level: >X-Spam-Status: No, score=-6.6 required=5.0 tests=BAYES_00, RCVD_IN_DNSWL_MED autolearn=ham version=3.2.5 >Date: Mon, 28 Dec 2009 13:51:21 +0100 >From: Klemens Vierlinger <klemens.vierlinger at="" ait.ac.at=""> >User-Agent: Thunderbird 2.0.0.23 (Windows/20090812) >MIME-Version: 1.0 >To: <bioconductor at="" stat.math.ethz.ch=""> >X-Tag-Only: YES >X-Filter-Node: phil2.ethz.ch >X-USF-Spam-Level: -- >X-USF-Spam-Status: hits=-2.6 tests=BAYES_00,SPF_PASS >X-USF-Spam-Flag: NO >X-Virus-Scanned: by amavisd-new at stat.math.ethz.ch >X-Mailman-Approved-At: Mon, 04 Jan 2010 18:59:48 +0100 >Subject: [BioC] Is color.pathway.by.objects (KEGGSOAP) working? >X-BeenThere: bioconductor at stat.math.ethz.ch >X-Mailman-Version: 2.1.11 >List-Id: The Bioconductor Project Mailing List <bioconductor.stat.math.ethz.ch> >List-Unsubscribe: <https: stat.ethz.ch="" mailman="" options="" bioconductor="">, <mailto:bioconductor-request at="" stat.math.ethz.ch?subject="unsubscribe"> >List-Archive: <https: stat.ethz.ch="" pipermail="" bioconductor=""> >List-Post: <mailto:bioconductor at="" stat.math.ethz.ch=""> >List-Help: <mailto:bioconductor-request at="" stat.math.ethz.ch?subject="help"> >List-Subscribe: <https: stat.ethz.ch="" mailman="" listinfo="" bioconductor="">, <mailto:bioconductor-request at="" stat.math.ethz.ch?subject="subscribe"> >Content-Transfer-Encoding: 7bit > >Dear All, > >when I execute the example code for 'color.pathway.by.objects' from >KEGGSOAP package, firefox shows me an empty page. >Any suggestions? > >Thanks for the replies! >Klemens > > > > sessionInfo() >R version 2.9.0 (2009-04-17) >i386-pc-mingw32 > >locale: >LC_COLLATE=English_United Kingdom.1252;LC_CTYPE=English_United >Kingdom.1252;LC_MONETARY=English_United >Kingdom.1252;LC_NUMERIC=C;LC_TIME=English_United Kingdom.1252 > >attached base packages: >[1] stats graphics grDevices utils datasets methods base > >other attached packages: >[1] RCurl_0.98-1 bitops_1.0-4.1 KEGGSOAP_1.18.0 > >loaded via a namespace (and not attached): >[1] SSOAP_0.4-6 XML_2.3-0 > > > >-- >KLEMENS VIERLINGER >Staff Scientist >AIT Austrian Institute of Technology GmbH >2444 Seibersdorf | Austria > >_______________________________________________ >Bioconductor mailing list >Bioconductor at stat.math.ethz.ch >https://stat.ethz.ch/mailman/listinfo/bioconductor >Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor Jianhua Zhang Department of Medical Oncology Dana-Farber Cancer Institute 44 Binney Street Boston, MA 02115-6084
cancer • 347 views
ADD COMMENTlink written 9.5 years ago by John Zhang2.9k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 204 users visited in the last hour