Question: AgiMicroRna package is not available at bioconductor or not in active form???
9.7 years ago by
Sean Davis ♦ 21k
Sean Davis ♦ 21k wrote:
On Wed, Mar 17, 2010 at 3:50 AM, neeraj rana <kushrn at="" gmail.com=""> wrote: > hi > > i install the R package R.2.10.0 for windows.And then i tried to install > bioconductor package ,but it is not installing.It's showing this error > >> source("http://bioconductor.org/biocLite.R") > Error in file(file, "r", encoding = encoding) : > ? cannot open the connection > In addition: Warning message: > In file(file, "r", encoding = encoding) : > ? unable to connect to 'bioconductor.org' on port 80. Hi, Neeraj. Are you behind a firewall? Is your network connection working? Sean > On Tue, Mar 16, 2010 at 4:06 PM, Sean Davis <seandavi at="" gmail.com=""> wrote: >> >> On Tue, Mar 16, 2010 at 6:24 AM, neeraj rana <kushrn at="" gmail.com=""> wrote: >> > hi, >> > >> > i need to analyse Agilent microrna microarray by the package AgiMicroRna >> > ,i >> > tried it to intstall but the msz ?came >> > >> >> source("http://bioconductor.org/biocLite.R") >> > Warning messages: >> > 1: In safeSource() : Redefining ?biocinstall? >> > 2: In safeSource() : Redefining ?biocinstallPkgGroups? >> > 3: In safeSource() : Redefining ?biocinstallRepos? >> >> ? ? biocLite("AgiMicroRna") >> > Using R version 2.9.2, biocinstall version 2.4.13. >> > Installing Bioconductor version 2.4 packages: >> >  "AgiMicroRna" >> > Please wait... >> > >> > Warning message: >> > In getDependencies(pkgs, dependencies, available, lib) : >> > ?package ?AgiMicroRna? is not available >> > >> > Please let me know whethr it is available or not,or any alternative ?? >> >> Hi, Neeraj. >> >> AgiMicroRna became available only in Bioconductor 2.5, which >> corresponds to R-2.10. ?You will need to upgrade your R to the newest >> version in order to use AgiMicroRna. >> >> Sean > >
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