Search
Question: error in loading 'org.Hs.eg.db'
0
gravatar for LIYUN
8.7 years ago by
LIYUN60
LIYUN60 wrote:
Hi, I am trying to install the package "hthgu133a.db", however there is a problem to load the package 'org.Hs.eg.db' and I don't know how to figure it out, here is the error information and the session infor. Hope some one can help~ > library('org.Hs.eg.db') Error in sqliteExecStatement(con, statement, bind.data) : RS-DBI driver: (error in statement: database is locked) Error : .onLoad failed in 'loadNamespace' for 'org.Hs.eg.db' Error: package/namespace load failed for 'org.Hs.eg.db' > sessionInfo() R version 2.10.1 (2009-12-14) x86_64-unknown-linux-gnu locale: [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 [5] LC_MONETARY=C LC_MESSAGES=en_US.UTF-8 [7] LC_PAPER=en_US.UTF-8 LC_NAME=C [9] LC_ADDRESS=C LC_TELEPHONE=C [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] RSQLite_0.8-4 DBI_0.2-5 annotate_1.24.1 [4] AnnotationDbi_1.8.2 e1071_1.5-23 class_7.3-1 [7] affy_1.24.2 Biobase_2.6.1 loaded via a namespace (and not attached): [1] affyio_1.14.0 preprocessCore_1.8.0 tools_2.10.1 [4] xtable_1.5-6 [[alternative HTML version deleted]]
ADD COMMENTlink modified 8.7 years ago by Seth Falcon7.4k • written 8.7 years ago by LIYUN60
0
gravatar for Seth Falcon
8.7 years ago by
Seth Falcon7.4k
Seth Falcon7.4k wrote:
On 4/19/10 2:30 AM, LiYun wrote: > Hi, > > I am trying to install the package "hthgu133a.db", however there is > a problem to load the package 'org.Hs.eg.db' and I don't know how to figure > it out, here is the error information and the session infor. > > Hope some one can help~ > >> library('org.Hs.eg.db') > > Error in sqliteExecStatement(con, statement, bind.data) : > > RS-DBI driver: (error in statement: database is locked) > > Error : .onLoad failed in 'loadNamespace' for 'org.Hs.eg.db' > > Error: package/namespace load failed for 'org.Hs.eg.db' Can you try starting a fresh R session, reinstalling the package using biocLite and then reporting back? + seth -- Seth Falcon Bioconductor Core Team | FHCRC
ADD COMMENTlink written 8.7 years ago by Seth Falcon7.4k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.2.0
Traffic: 366 users visited in the last hour