Hello, could you please tell me how to get geneID from give KEGG pathway? such as >library("KEGG.db") >mget("04010", org.hs.egKEGG) #04010 is the KEGG pathway no. thanks jian [[alternative HTML version deleted]]

Hi Jian, ## You should not need the KEGG library for this, just the org.Hs.eg.db package library(org.Hs.eg.db) ## Calling the following will get you all the entrez gene IDs for the given KEGG pathway ID. mget("04010", revmap(org.Hs.egPATH)) Hopefully this is what you wanted? Marc On 06/08/2010 01:20 AM, Yuan Jian wrote: > Hello, > could you please tell me how to get geneID from give KEGG pathway? > > such as > >> library("KEGG.db") >> mget("04010", org.hs.egKEGG) #04010 is the KEGG pathway no. >> > thanks > jian > > > > > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor > >