Hi David Yes, the logFC values given in edgeR are the log2 fold changes. To get the non-log FC it is just 2^(logFC). Best regards Davis --------------------------- Original Message ---------------------------- Subject: [BioC] edgeR From: "David martin" <vilanew@gmail.com> Date: Tue, June 22, 2010 8:13 pm To: bioconductor@stat.math.ethz.ch ---------------------------------------------------------------------- ---- In the edgeR package fold changes rare given as logFC. Is that the log2 value ? how can i get the non log FC ? is that 2^(logFC) ? thanks _______________________________________________ Bioconductor mailing list Bioconductor@stat.math.ethz.ch https://stat.ethz.ch/mailman/listinfo/bioconductor Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor ---------------------------------------------------------------------- -- Davis J McCarthy Research Technician Bioinformatics Division Walter and Eliza Hall Institute of Medical Research 1G Royal Parade, Parkville, Vic 3052, Australia dmccarthy@wehi.edu.au http://www.wehi.edu.au ______________________________________________________________________ The information in this email is confidential and intend...{{dropped:8}}