ChIPpeakAnno
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Julie Zhu ★ 4.3k
@julie-zhu-3596
Last seen 4 months ago
United States
Kathleen, Please refer to the discussion at http://permalink.gmane.org/gmane.science.biology.informatics.conductor /30115 . Thanks! Best regards, Julie On 10/26/10 11:52 AM, "Kathleen O'Hagan" <kathleen.ohagan at="" qub.ac.uk=""> wrote: > Dear Dr. Zhu > > I am currently using the ChIPpeakAnno bioconductor package to annotated > Chip-seq data. I have 1 sample that have been immunoprecipitated with 2 > different antibodys for 2 different histone modifications. I am interested in > indentifing genes that have both histone marks. I am interesred in your > "makeVennDiagram" code. My question is- how is the "totalTest" parameter > defined? Is it the total number of peaks in the file with the most peaks? > > Kind regards > > Kathleen O'Hagan
ChIPpeakAnno ChIPpeakAnno • 739 views
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