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Question: SNPlocs.Hsapiens.dbSNP.20101109 won't load
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gravatar for Pete Shepard
6.3 years ago by
Pete Shepard240
Pete Shepard240 wrote:
Hello All, I am getting the following error: Warning message: In getDependencies(pkgs, dependencies, available, lib) : package ‘SNPlocs.Hsapiens.dbSNP.20101109’ is not available when I run: biocLite("SNPlocs.Hsapiens.dbSNP.20101109") This package is from February 24, 2011 according to the package pdf but I have run: update.packages(repos=biocinstallRepos(), ask=FALSE, checkBuilt=TRUE) and I still get the error. Running R 2.10 here Has anyone got this to load or had a similar error? Thanks... [[alternative HTML version deleted]]
ADD COMMENTlink modified 6.3 years ago by Sean Davis20k • written 6.3 years ago by Pete Shepard240
0
gravatar for Sean Davis
6.3 years ago by
Sean Davis20k
United States
Sean Davis20k wrote:
On Mon, Feb 28, 2011 at 7:50 PM, Pete Shepard <peter.shepard@gmail.com>wrote: > Hello All, > > I am getting the following error: > > Warning message: > In getDependencies(pkgs, dependencies, available, lib) : > package ‘SNPlocs.Hsapiens.dbSNP.20101109’ is not available > when I run: > > biocLite("SNPlocs.Hsapiens.dbSNP.20101109") > > This package is from February 24, 2011 according to the package pdf but I > have run: > > update.packages(repos=biocinstallRepos(), ask=FALSE, checkBuilt=TRUE) > > and I still get the error. Running R 2.10 here > > Hi, Pete. You are running an outdated version of R. The package you note above is not available for R-2.10. I would suggest updating your R version to the current version (2.12). Then, that package will be available. The version of bioconductor needs to match the version of R, so to get a current version of bioconductor packages, you need to get a current version of R. Sean [[alternative HTML version deleted]]
ADD COMMENTlink written 6.3 years ago by Sean Davis20k
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