Hi Brett, On 11-06-08 09:31 AM, Brett Maricque wrote: > Dear Herve, > > Can the danRer7 genome assembly be added to the BSgenome package for > Bioconductor? The danRer7 genome is already in Bioconductor. Try this (from R-2.13 or R-2.14): library(BSgenome) available.genomes() and you should see it. Then install it with biocLite() (it might take a while, it's 400+ MB). Please let us know if you run into problems. Thanks, H. > > Thank you in advance, > > Brett Maricque > > > Brett Maricque > Washington University in St. Louis > PhD Candidate, Lab of Dr. Ting Wang > Program in Computational and Systems Biology > -- Hervé Pagès Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M1-B514 P.O. Box 19024 Seattle, WA 98109-1024 E-mail: hpages at fhcrc.org Phone: (206) 667-5791 Fax: (206) 667-1319