try to install bioc v2.9 but always get v2.8 in centos 5.1
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Dan Tenenbaum ★ 8.2k
@dan-tenenbaum-4256
Last seen 3.1 years ago
United States
On Nov 13, 2011 12:13 PM, "Rongkun Shen" <shenr@ohsu.edu> wrote: > > Thanks for your quick reply. However, I've already install R 2.14.0 -- please see my sessionInfo. > Sorry, you referred to two different machine configurations and I wasn't sure which one your sessionInfo came from. Taking a closer look, it seems like you do have BioC 2.9 installed. The version of BiocInstaller you have installed is 1.2.1 which is the correct version for BioC 2.9. See http://www.bioconductor.org/packages/release/bioc/html/BiocInstaller.h tml Or is there something else that makes you think you have 2.8 installed? Dan > Best regards, > --Rongkun > > > On 2011-11-13 Sun 12:08 PM, Dan Tenenbaum wrote: >> >> >> On Nov 13, 2011 11:51 AM, "Rongkun Shen [guest]" <guest@bioconductor.org> wrote: >> > >> > >> > Hi, >> > I installed R 2.14.0 and tried to install bioc 2.9 in centos 5.1 64bit. It turned out that it always got bioc b2.8 installed. I wonder if there is anyway to force install bioc 2.9. Thanks! >> > >> > By the way, there is no problem to install bioc 2.9 in Ubuntu >> > 10.04LTS. >> >> BioC 2.8 works with R 2.13 and BioC 2.9 works with R 2.14. If you want to use BioC 2.9, install R 2.14. >> Dan >> > >> > Best, >> > Rongkun Shen >> > >> > -- output of sessionInfo(): >> > >> > R version 2.14.0 (2011-10-31) >> > Platform: x86_64-unknown-linux-gnu (64-bit) >> > >> > locale: >> > [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C >> > [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 >> > [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 >> > [7] LC_PAPER=C LC_NAME=C >> > [9] LC_ADDRESS=C LC_TELEPHONE=C >> > [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C >> > >> > attached base packages: >> > [1] stats graphics grDevices utils datasets methods base >> > >> > other attached packages: >> > [1] BiocInstaller_1.2.1 >> > >> > loaded via a namespace (and not attached): >> > [1] tools_2.14.0 >> > >> > >> > -- >> > Sent via the guest posting facility at bioconductor.org. >> > >> > _______________________________________________ >> > Bioconductor mailing list >> > Bioconductor@r-project.org >> > https://stat.ethz.ch/mailman/listinfo/bioconductor >> > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor [[alternative HTML version deleted]]
BiocInstaller BiocInstaller • 583 views
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